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Scholarly Works

Feng Cui
Assistant Professor

2015 Submissions

Journal Paper

LoVerso, Peter R and Feng Cui. "A Computational Pipeline for Cross-Species Analysis of RNA-seq Data Using R and Bioconductor." Bioinformatics and Biology Insights 9. (2015): 165-174. Print. *

LoVerso, Peter R, Christopher M Wachter, and Feng Cui. "Cross-species Transcriptomic Comparison of In Vitro and In Vivo Mammalian Neural Cells." Bioinformatics and Biology Insights 9. (2015): 153-164. Print. *

Norouzi, Davood, et al. "Topological diversity of chromatin fibers: Interplay between nucleosome repeat length, DNA linking number and the level of transcription." AIMS Biophysics 2. 4 (2015): 613-629. Print. *

2014 Submissions

Journal Paper

Cui, Feng and Victor B. Zhurkin. "Rotational Positioning of Nucleosomes Facilitates Selective Binding of p53 to Response Elements Associated with Cell Cycle Arrest." Nucleic Acids Research 42. 2 (2014): 836-847. Print. ˜

Cui, Feng, et al. "Prediction of Nucleosome Rotational Positioning in Yeast and Human Genomes Based on Sequence-dependent DNA Anisotropy." BMC Bioinformatics 15. (2014): 313. Print. ˜

Alharbi, Bader A., et al. "nuMap: A Web Platform for Accurate Prediction of Nucleosome Positioning." Genomics Proteomics and Bioinformatics 12. 5 (2014): 249-253. Print. ˜

2012 Submissions

Journal Paper

Cui, F, et al. "Transcriptional Activation of Yeast Genes Disrupts Intragenic Nucleosome Phasing." Nucleic Acids Research 40. 21 (2012): 10753-10764. Print. *

Macvanin, M, et al. "Noncoding RNAs Binding to the Nucleoid Protein HU in Escherichia Coli." Journal of Bacteriology 194. 22 (2012): 6046-6055. Print. *