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Bioinformatics BS

http://www.bioinformatics.rit.edu/

Program overview

Bioinformatics represents the marriage of biotechnology and the computing sciences. Bioinformaticists use computers to analyze, organize, and visualize biological data in ways that increase our understanding of this data and lead to new discoveries. Graduates receiving the BS degree are well-qualified for many rewarding careers, including those in bioinformatics software development, biomedical research, biotechnology, comparative genomics, genomics, molecular imaging, pharmaceutical research and development, proteomics, and vaccine development.

The bioinformatics program is a truly interdisciplinary degree and its curriculum was developed by faculty in the departments of biological sciences, chemistry, computer science, mathematics and statistics, and information technology, with the guidance of individuals in the bioinformatics and biotechnology industries. The program meets the needs of prospective employers in this challenging and rapidly changing field.

Requirements for the BS degree in bioinformatics

Students must meet the minimum graduation requirements of the university as described in this bulletin. In addition, the program requires successful completion of all the courses listed in the typical course schedule, plus one cooperative education experience.

Cooperative education

The program requires the completion of one cooperative education experience. This experience permits the student to participate in applied bioinformatics, using current technologies to gain a practical perspective. More than 65 organizations in industry, government, and academia employ our students in short-term (10-20 week), full-time paid positions. Co-op positions can be held during the summer and/or the regular academic year. No tuition is charged for co-op participation. If a student elects to pursue co-op during the regular academic year, he or she will take the same number of academic class terms and may need to extend the date of graduation beyond the traditional four years.

Bioinformatics, BS degree, typical course sequence (quarters)

Course Qtr. Cr. Hrs.
First Year
1001-200 Freshman Symposium 1
1001-251, 252, 253 Introduction to Biology I, II, III 12
1001-265 Unix Under the Hood 2
1001-260 Introduction to Bioinformatics 2
4003-241 Problem-Based Introduction to Computer Science 4
4003-242 Data Structure Problem Solving 4
1016-281, 282 Calculus I, II 8
  Liberal Arts* 12
1105-051, 052 First-Year Enrichment 2
  Wellness Education† 0
Second Year
1001-311 Cell Biology 4
1001-350 Molecular Biology 4
1001-493 Bioinformatics 4
4003-243 Object-Oriented Programming 4
1011-215, 216 General and Analytical Chemistry I, II 7
1011-205, 206 Chemical Principles Lab I, II 2
1016-265, 366 Discrete Math I, II 8
1016-319 Data Analysis 4
  Liberal Arts* 12
Third and Fourth Years
1001-404 Introduction to Microbiology 4
4002-462 Introduction to Bioinformatics Computing 4
1001-450 Genetic Engineering 5
1001-421 Genetics 4
1001-492 Genomics 4
1001-494 Molecular Modeling and Proteomics 4
4002-563 Functional and Translational Bioinformatics 4
4003-531 Parallel Computing I 4
1009-502 Biochemistry: Conformation and Dynamics 3
1013-231 Organic Chemistry I 3
1013-235 Organic Chemistry Lab I 1
1009-503 Biochemistry: Metabolism 3
4002-360 Introduction to Databases and Data Modeling 4
4003-334 Computer Science IV 4
1016-415 Statistical Analysis for Bioinformatics 4
  Liberal Arts* 12
  University-wide Electives 18
1001-499 Cooperative Education (required) Co-op
Total Quarter Credit Hours 182

* Please see Liberal Arts General Education Requirements for more information.

† Please see Wellness Education Requirement for more information.

Bioinformatics, BS degree, typical course sequence (semesters), effective fall 2013

Course Sem. Cr. Hrs.
First Year
BIOL-121  Introductory Biology I 4
BIOL-130 Introduction to Bioinformatics 3
CSCI-141 Introdution to Computer Problem Solving 4
  LAS Foundation 1: First Year Seminar 3
BIOL-122 Introductory Biology II 4
CSCI-142 Computer Problem Solving with Software Structures 4
ENGL-150 LAS Foundation 2: Writing Seminar 3
MATH-161 LAS Perspective 7A: Applied Calculus 4
  Wellness Education 0
Second Year
BIOL-201 Cellular and Molecular Biology 4
  LAS Perspective 1 3
MATH-190 LAS Perspective 7b: Discrete Math 3
CHMG-141 LAS Perspective 5: General and Analytical Chemistry I 3
CHMG-145 LAS Perspective 5: General and Analytical Chemistry I Lab 1
CSCI-243 The Mechanics of Programming 3
BIOL-321 Genetics 3
  LAS Perspective 2 3
STAT-145 Introduction to Statistics I 3
CHMG-142 LAS Perspective 6: General and Analytical Chemistry II 3
CHMG-146 LAS Perspective 6: General and Analytical Chemistry II Lab 1
  LAS Perspective 3 3
Third Year
CSCI-251 Concepts of Parallel and Distributed Systems 3
  LAS Perspective 4 3
BIOL-330 Bioinformatics 3
CHMO-231 Organic Chemistry I 3
CHMO-235 Organic Chemistry I Lab 1
ISTE-230 Introduction to Database and Data Modeling 3
BIOL-450 Genetic Engineering (WI) 5
BIOL-230 Bioinformatics Languages 3
  LAS Immersion 1 3
  Free Elective 3
BIOL-499 Cooperative Education (summer) Co-op
Fourth Year
BIOL-425  Ethics in Bioinformatics 3
CHMB-402 Biochemistry I 3
BIOL-340 Genomics 3
STAT-295 Statistical Analysis for Bioinformatics 3
BIOL-430 Bioinformatics Resources 3
BIOL-494 Molecular Modeling and Proteomics 3
CHMB-403 Biochemistry II 3
  LAS Immersion 2, 3 6
  Free Elective 3
Total Semester Credit Hours 122

Accelerated dual degree option

The BS program may be combined with the MS program in bioinformatics, allowing undergraduate students to acquire both degrees in as few as five years. Undergraduate students with a minimum overall GPA of 3.2 may apply to the bioinformatics committee for entry before the completion of their third year of study. Students in the combined option are required to take graduate-level courses during their fourth year and complete an approved MS thesis during their final year of study.

Bioinformatics, BS/MS degree, typical course sequence (quarters)

Course Qtr. Cr. Hrs.
First Year
1001-200 Freshman Symposium 1
1001-251, 252, 253 Introduction to Biology I, II, III 12
1001-265 Unix Under the Hood 2
1001-260 Introduction to Bioinformatics 2
4003-241 Problem-Based Introduction to Computer Science 4
4003-242 Data Structure Problem Solving 4
1016-281, 282 Calculus I, II 8
  Liberal Arts* 16
1105-051, 052 First-Year Enrichment 2
  Wellness Education† 0
Second Year
1001-311 Cell Biology 4
1001-350 Molecular Biology 4
1001-493 Bioinformatics 4
4003-243 Object-Oriented Programming 4
1011-215, 216 General and Analytical Chemistry I, II 7
1011-205, 206 Chemical Principles Lab I, II 2
1016-265, 366 Discrete Math I, II 8
1016-319 Data Analysis 4
  Liberal Arts* 8
  University-wide Elective 4
Third Year
1001-404 Introduction to Microbiology 4
4002-462 Introduction to Bioinformatics Computing 4
1001-450 Genetic Engineering 5
4002-563 Functional and Translational Bioinformatics 4
4002-360 Introduction to Databases and Data Modeling 4
1013-231 Organic Chemistry I 3
1013-235 Organic Chemistry I Lab 1
1016-415 Statistical Analysis for Bioinformatics 4
4003-334 Computer Science 4 4
  Liberal Arts* 8
  University-wide Electives 8
1001-499 Cooperative Education (required) Co-op
Fourth Year
1001-421 Genetics 4
1001-492 Genomics 4
1001-725 Ethics in Bioinformatics 3
1001-494 Molecular Modeling and Proteomics 4
4005-735 Parallel Computing I 4
1009-702, 703, 704 Biochemistry I, II, III 9
  Liberal Arts* 4
  University-wide Electives 8
Fifth Year
Choose one of the following: 2
    1001-759     Advanced Database Topics  
    1001-722     Bioinformatics Seminar  
1001-890 Thesis 10
  Graduate Electives‡ 22
Total Quarter Credit Hours 223

* Please see Liberal Arts General Education Requirements for more information.

† Please see Wellness Education Requirement for more information.

‡ Graduate electives may be comprised of any graduate-level course in biological sciences, chemistry, mathematics and statistics, computer science, information technology, or business. These courses provide flexibility so that students can pursue a course of study consistent with their personal interests and professional goals.

Bioinformatics, BS/MS degree, typical course sequence (semesters), effective fall 2013

Course Sem. Cr. Hrs.
First Year
BIOL-121 Introductory Biology I 4
BIOL-130 Introduction to Bioinformatics 3
CSCI-141 Introdution to Computer Problem Solving 4
  LAS Foundation 1: First Year Seminar 3
BIOL-122 Introduction to Biology II 4
CSCI-141 Computer Problem Solving with Software Structures 4
ENGL-150 LAS Foundation 2: Writing Seminar 3
MATH-161 Applied Calculus 4
Second Year
BIOL-201 Cellular and Molecular Biology 4
  LAS Perspective 1 3
MATH-190 Discrete Math 3
CHMG-141 General and Analytical Chemistry I 3
CHMG-145 General and Analytical Chemistry I Lab 1
CSCI-243 The Mechanics of Programming 3
BIOL-321 Genetics 3
  LAS Perspective 2 3
STAT-145 Introduction to Statistics I 3
CHMG-142 General and Analytical Chemistry II 3
CHMG-146 General and Analytical Chemistry II Lab 1
  Program Elective 3
Third Year
CSCI-251 Concepts of Parallel and Distribution Systems 3
  LAS Perspective 3, 4 6
BIOL-330 Bioinformatics 3
CHMO-231 Organic Chemistry I 3
CHMO-232 Organic Chemistry Lab 1 1
ISTE-230 Introduction to Databases and DM 3
BIOL-450 Genetic Engineering (WI) 5
  LAS Immersion 1 3
BIOL-230 Bioinformatics Languages 3
  Program Elective 3
Fourth Year
  Open Elective 3
CHMB-402 Biochemistry I 3
BIOL-340 Genomics 3
STAT-195 Statistical Analysis for Bioinformatics 3
  LAS Immersion 2 3
BIOL-794 Graduate Molecular Modeling and Proteomics 3
CHMG-403 Biochemistry II 3
  LAS Immersion 3 3
  Open Elective 3
Fifth Year
BIOL-725 Graduate Ethics in Bioinformatics 3
BIOL-635 Bioinformatics Seminar 3
BIOL-730 Graduate Bioinformatics Resources 3
MATH-695 Statistical Models for Bioinformatics 3
  Graduate Electives* 9
BIOL-790 Thesis 9
Total Semester Credit Hours 122

* Graduate electives may be any graduate level course deemed related to the field of bioinformatics by the program director.