http://www.bioinformatics.rit.edu/
Program overview
Bioinformatics represents the marriage of biotechnology and the computing sciences. Bioinformaticists use computers to analyze, organize, and visualize biological data in ways that increase our understanding of this data and lead to new discoveries. Graduates receiving the BS degree are well-qualified for many rewarding careers, including those in bioinformatics software development, biomedical research, biotechnology, comparative genomics, genomics, molecular imaging, pharmaceutical research and development, proteomics, and vaccine development.
The bioinformatics program is a truly interdisciplinary degree and its curriculum was developed by faculty in the departments of biological sciences, chemistry, computer science, mathematics and statistics, and information technology, with the guidance of individuals in the bioinformatics and biotechnology industries. The program meets the needs of prospective employers in this challenging and rapidly changing field.
Requirements for the BS degree in bioinformatics
Students must meet the minimum graduation requirements of the university as described in this bulletin. In addition, the program requires successful completion of all the courses listed in the typical course schedule, plus one cooperative education experience.
Cooperative education
The program requires the completion of one cooperative education experience. This experience permits the student to participate in applied bioinformatics, using current technologies to gain a practical perspective. More than 65 organizations in industry, government, and academia employ our students in short-term (10-20 week), full-time paid positions. Co-op positions can be held during the summer and/or the regular academic year. No tuition is charged for co-op participation. If a student elects to pursue co-op during the regular academic year, he or she will take the same number of academic class terms and may need to extend the date of graduation beyond the traditional four years.
Bioinformatics, BS degree, typical course sequence (quarters)
| Course | Qtr. Cr. Hrs. | |
|---|---|---|
| First Year | ||
| 1001-200 | Freshman Symposium | 1 |
| 1001-251, 252, 253 | Introduction to Biology I, II, III | 12 |
| 1001-265 | Unix Under the Hood | 2 |
| 1001-260 | Introduction to Bioinformatics | 2 |
| 4003-241 | Problem-Based Introduction to Computer Science | 4 |
| 4003-242 | Data Structure Problem Solving | 4 |
| 1016-281, 282 | Calculus I, II | 8 |
| Liberal Arts* | 12 | |
| 1105-051, 052 | First-Year Enrichment | 2 |
| Wellness Education† | 0 | |
| Second Year | ||
| 1001-311 | Cell Biology | 4 |
| 1001-350 | Molecular Biology | 4 |
| 1001-493 | Bioinformatics | 4 |
| 4003-243 | Object-Oriented Programming | 4 |
| 1011-215, 216 | General and Analytical Chemistry I, II | 7 |
| 1011-205, 206 | Chemical Principles Lab I, II | 2 |
| 1016-265, 366 | Discrete Math I, II | 8 |
| 1016-319 | Data Analysis | 4 |
| Liberal Arts* | 12 | |
| Third and Fourth Years | ||
| 1001-404 | Introduction to Microbiology | 4 |
| 4002-462 | Introduction to Bioinformatics Computing | 4 |
| 1001-450 | Genetic Engineering | 5 |
| 1001-421 | Genetics | 4 |
| 1001-492 | Genomics | 4 |
| 1001-494 | Molecular Modeling and Proteomics | 4 |
| 4002-563 | Functional and Translational Bioinformatics | 4 |
| 4003-531 | Parallel Computing I | 4 |
| 1009-502 | Biochemistry: Conformation and Dynamics | 3 |
| 1013-231 | Organic Chemistry I | 3 |
| 1013-235 | Organic Chemistry Lab I | 1 |
| 1009-503 | Biochemistry: Metabolism | 3 |
| 4002-360 | Introduction to Databases and Data Modeling | 4 |
| 4003-334 | Computer Science IV | 4 |
| 1016-415 | Statistical Analysis for Bioinformatics | 4 |
| Liberal Arts* | 12 | |
| University-wide Electives | 18 | |
| 1001-499 | Cooperative Education (required) | Co-op |
| Total Quarter Credit Hours | 182 | |
* Please see Liberal Arts General Education Requirements for more information.
† Please see Wellness Education Requirement for more information.
Bioinformatics, BS degree, typical course sequence (semesters), effective fall 2013
| Course | Sem. Cr. Hrs. | |
|---|---|---|
| First Year | ||
| BIOL-121 | Introductory Biology I | 4 |
| BIOL-130 | Introduction to Bioinformatics | 3 |
| CSCI-141 | Introdution to Computer Problem Solving | 4 |
| LAS Foundation 1: First Year Seminar | 3 | |
| BIOL-122 | Introductory Biology II | 4 |
| CSCI-142 | Computer Problem Solving with Software Structures | 4 |
| ENGL-150 | LAS Foundation 2: Writing Seminar | 3 |
| MATH-161 | LAS Perspective 7A: Applied Calculus | 4 |
| Wellness Education | 0 | |
| Second Year | ||
| BIOL-201 | Cellular and Molecular Biology | 4 |
| LAS Perspective 1 | 3 | |
| MATH-190 | LAS Perspective 7b: Discrete Math | 3 |
| CHMG-141 | LAS Perspective 5: General and Analytical Chemistry I | 3 |
| CHMG-145 | LAS Perspective 5: General and Analytical Chemistry I Lab | 1 |
| CSCI-243 | The Mechanics of Programming | 3 |
| BIOL-321 | Genetics | 3 |
| LAS Perspective 2 | 3 | |
| STAT-145 | Introduction to Statistics I | 3 |
| CHMG-142 | LAS Perspective 6: General and Analytical Chemistry II | 3 |
| CHMG-146 | LAS Perspective 6: General and Analytical Chemistry II Lab | 1 |
| LAS Perspective 3 | 3 | |
| Third Year | ||
| CSCI-251 | Concepts of Parallel and Distributed Systems | 3 |
| LAS Perspective 4 | 3 | |
| BIOL-330 | Bioinformatics | 3 |
| CHMO-231 | Organic Chemistry I | 3 |
| CHMO-235 | Organic Chemistry I Lab | 1 |
| ISTE-230 | Introduction to Database and Data Modeling | 3 |
| BIOL-450 | Genetic Engineering (WI) | 5 |
| BIOL-230 | Bioinformatics Languages | 3 |
| LAS Immersion 1 | 3 | |
| Free Elective | 3 | |
| BIOL-499 | Cooperative Education (summer) | Co-op |
| Fourth Year | ||
| BIOL-425 | Ethics in Bioinformatics | 3 |
| CHMB-402 | Biochemistry I | 3 |
| BIOL-340 | Genomics | 3 |
| STAT-295 | Statistical Analysis for Bioinformatics | 3 |
| BIOL-430 | Bioinformatics Resources | 3 |
| BIOL-494 | Molecular Modeling and Proteomics | 3 |
| CHMB-403 | Biochemistry II | 3 |
| LAS Immersion 2, 3 | 6 | |
| Free Elective | 3 | |
| Total Semester Credit Hours | 122 | |
Accelerated dual degree option
The BS program may be combined with the MS program in bioinformatics, allowing undergraduate students to acquire both degrees in as few as five years. Undergraduate students with a minimum overall GPA of 3.2 may apply to the bioinformatics committee for entry before the completion of their third year of study. Students in the combined option are required to take graduate-level courses during their fourth year and complete an approved MS thesis during their final year of study.
Bioinformatics, BS/MS degree, typical course sequence (quarters)
| Course | Qtr. Cr. Hrs. | |
|---|---|---|
| First Year | ||
| 1001-200 | Freshman Symposium | 1 |
| 1001-251, 252, 253 | Introduction to Biology I, II, III | 12 |
| 1001-265 | Unix Under the Hood | 2 |
| 1001-260 | Introduction to Bioinformatics | 2 |
| 4003-241 | Problem-Based Introduction to Computer Science | 4 |
| 4003-242 | Data Structure Problem Solving | 4 |
| 1016-281, 282 | Calculus I, II | 8 |
| Liberal Arts* | 16 | |
| 1105-051, 052 | First-Year Enrichment | 2 |
| Wellness Education† | 0 | |
| Second Year | ||
| 1001-311 | Cell Biology | 4 |
| 1001-350 | Molecular Biology | 4 |
| 1001-493 | Bioinformatics | 4 |
| 4003-243 | Object-Oriented Programming | 4 |
| 1011-215, 216 | General and Analytical Chemistry I, II | 7 |
| 1011-205, 206 | Chemical Principles Lab I, II | 2 |
| 1016-265, 366 | Discrete Math I, II | 8 |
| 1016-319 | Data Analysis | 4 |
| Liberal Arts* | 8 | |
| University-wide Elective | 4 | |
| Third Year | ||
| 1001-404 | Introduction to Microbiology | 4 |
| 4002-462 | Introduction to Bioinformatics Computing | 4 |
| 1001-450 | Genetic Engineering | 5 |
| 4002-563 | Functional and Translational Bioinformatics | 4 |
| 4002-360 | Introduction to Databases and Data Modeling | 4 |
| 1013-231 | Organic Chemistry I | 3 |
| 1013-235 | Organic Chemistry I Lab | 1 |
| 1016-415 | Statistical Analysis for Bioinformatics | 4 |
| 4003-334 | Computer Science 4 | 4 |
| Liberal Arts* | 8 | |
| University-wide Electives | 8 | |
| 1001-499 | Cooperative Education (required) | Co-op |
| Fourth Year | ||
| 1001-421 | Genetics | 4 |
| 1001-492 | Genomics | 4 |
| 1001-725 | Ethics in Bioinformatics | 3 |
| 1001-494 | Molecular Modeling and Proteomics | 4 |
| 4005-735 | Parallel Computing I | 4 |
| 1009-702, 703, 704 | Biochemistry I, II, III | 9 |
| Liberal Arts* | 4 | |
| University-wide Electives | 8 | |
| Fifth Year | ||
| Choose one of the following: | 2 | |
| 1001-759 | Advanced Database Topics | |
| 1001-722 | Bioinformatics Seminar | |
| 1001-890 | Thesis | 10 |
| Graduate Electives‡ | 22 | |
| Total Quarter Credit Hours | 223 | |
* Please see Liberal Arts General Education Requirements for more information.
† Please see Wellness Education Requirement for more information.
‡ Graduate electives may be comprised of any graduate-level course in biological sciences, chemistry, mathematics and statistics, computer science, information technology, or business. These courses provide flexibility so that students can pursue a course of study consistent with their personal interests and professional goals.
Bioinformatics, BS/MS degree, typical course sequence (semesters), effective fall 2013
| Course | Sem. Cr. Hrs. | |
|---|---|---|
| First Year | ||
| BIOL-121 | Introductory Biology I | 4 |
| BIOL-130 | Introduction to Bioinformatics | 3 |
| CSCI-141 | Introdution to Computer Problem Solving | 4 |
| LAS Foundation 1: First Year Seminar | 3 | |
| BIOL-122 | Introduction to Biology II | 4 |
| CSCI-141 | Computer Problem Solving with Software Structures | 4 |
| ENGL-150 | LAS Foundation 2: Writing Seminar | 3 |
| MATH-161 | Applied Calculus | 4 |
| Second Year | ||
| BIOL-201 | Cellular and Molecular Biology | 4 |
| LAS Perspective 1 | 3 | |
| MATH-190 | Discrete Math | 3 |
| CHMG-141 | General and Analytical Chemistry I | 3 |
| CHMG-145 | General and Analytical Chemistry I Lab | 1 |
| CSCI-243 | The Mechanics of Programming | 3 |
| BIOL-321 | Genetics | 3 |
| LAS Perspective 2 | 3 | |
| STAT-145 | Introduction to Statistics I | 3 |
| CHMG-142 | General and Analytical Chemistry II | 3 |
| CHMG-146 | General and Analytical Chemistry II Lab | 1 |
| Program Elective | 3 | |
| Third Year | ||
| CSCI-251 | Concepts of Parallel and Distribution Systems | 3 |
| LAS Perspective 3, 4 | 6 | |
| BIOL-330 | Bioinformatics | 3 |
| CHMO-231 | Organic Chemistry I | 3 |
| CHMO-232 | Organic Chemistry Lab 1 | 1 |
| ISTE-230 | Introduction to Databases and DM | 3 |
| BIOL-450 | Genetic Engineering (WI) | 5 |
| LAS Immersion 1 | 3 | |
| BIOL-230 | Bioinformatics Languages | 3 |
| Program Elective | 3 | |
| Fourth Year | ||
| Open Elective | 3 | |
| CHMB-402 | Biochemistry I | 3 |
| BIOL-340 | Genomics | 3 |
| STAT-195 | Statistical Analysis for Bioinformatics | 3 |
| LAS Immersion 2 | 3 | |
| BIOL-794 | Graduate Molecular Modeling and Proteomics | 3 |
| CHMG-403 | Biochemistry II | 3 |
| LAS Immersion 3 | 3 | |
| Open Elective | 3 | |
| Fifth Year | ||
| BIOL-725 | Graduate Ethics in Bioinformatics | 3 |
| BIOL-635 | Bioinformatics Seminar | 3 |
| BIOL-730 | Graduate Bioinformatics Resources | 3 |
| MATH-695 | Statistical Models for Bioinformatics | 3 |
| Graduate Electives* | 9 | |
| BIOL-790 | Thesis | 9 |
| Total Semester Credit Hours | 122 | |
* Graduate electives may be any graduate level course deemed related to the field of bioinformatics by the program director.