Publications

2025

Chichester, C. C., Yamakuchi, M.,Takenouchi, K., Hashiguchi, T., and Maywar, D. N. 2025, Analytical Basal-State Model of the Glucose, Insulin, and C-Peptide Systems for Type 2 Diabetes, MDPI, Bioengineering, 12(5), 553, https://doi.org/10.3390/bioengineering12050553, 21 May 2025.

Khanal, B. 2025, Towards Robust Deep Learning for Medical Imaging With Limited and Noisy Labeled Data, Rochester Institute of Technology ProQuest Dissertations & Theses, Order No. 32038590, Rochester Institute of Technology, NY, USA, 19 May 2025. 

Legault, A., Alexani, E., Castellanos, R., Evans, C. Figer, D. F., Fullerton, A. W., Garcia, M., Herrero, A., Hillier, D. J., Lennon, D. J., Najarro, P., Negueruela, I., Patrick, L., Puls, J., Rodriguez Del Pino, B., Schoedel, R., and Tramper, F., 2025, Dissecting the Arches cluster: An ideal test bed to study the metal-rich Universe, JWST Proposal. Cycle 4, ID. #7169, 11 March 2025. 

Khanal, B., Pokhrel, S., Bhandari, S., Rana, R., Shrestha, N., Gurung, R. B., Linte, C., Watson, A., Shrestha, Y. R., and Bhattarai B. 2025, Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models, arXiv:2505.07001v1, cs.CV, https://doi.org/10.48550/arXiv.2505.07001, 11 May 2025.

Odden, T. O. B., and Zwickl, B. 2025, How physics students build computational literacy by creating computational literature, Journal of the Learning Sciences, Taylor & Francis Group, LLC​​​​​​​, https://doi.org/10.1080/10508406.2025.2494791, 2 May 2025.

2024

Verostek, M., Miller, C. W. and Zwickl, B. M. 2024, Alleviating the Stress of Finding a PhD Advisor, American Physical Society, Physics Magazine, DOI: 10.1103/Physics.17.76.

Zwickl, Benjamin M., Verostek, Mike, Miller, Casey W. 2024, Modeling when and how physics PhD students search for a research group: the role of interests and prior research experiences in timely group integration, https://arxiv.org/pdf/2404.11580.pdf, 23 April 2024.

Zhang, K., Xiao, K., Luntz-Martin, D., Sun, P., Sharma, S., Bhattacharya, M., and Vamivakas, A. N. 2024, Coherent control of an optical tweezer phonon laser, Opt. Express, 32, 14735-14745, https://doi.org/10.1364/OE.511600, 8 April 2024.

Kundu, Bipasha, Yang, Zixin, Simon, Richard, and Linte, Cristian 2024, Comparative analysis of non-rigid registration techniques for liver surface registration, Proc. SPIE 12928, Medical Imaging 2024: Image-Guided Procedures, Robotic Interventions, and Modeling, 129282B, https://doi.org/10.1117/12.3008594, 29 March 2024.

Silich, E. M., Bellomi, E., Sayers, J., ZuHone, J., Chadayammuri, U., Golwala, S., Hughes, D., Montaña, A., Mroczkowski, T., Nagai, D., Sánchez, D., Stanford, S. A., Wilson, G., Zemcov, M., and Zitrin, A. 2024, Improved Constraints on Mergers with SZ, Hydrodynamical simulations, Optical, and X-ray (ICM-SHOX), Paper II: Galaxy cluster sample overview, EPJ Web of Conferences 293, EDP Sciences, https://doi.org/10.1051/epjconf/202429300050, 28 March 2024.

2023

Khanal, B., Bhattarai, B., Khanal, B., Stoyanov, D., and Linte, C. A. 2023, M-VAAL: Multimodal Variational Adversarial Active Learning for Downstream Medical Image Analysis Tasks, arXiv:2306.12376v1, 21 Jun 2023.

Polly, Stephen, Bogner, Brandon, Fedorenko, Anastasiia, Phokharel, Nikhil, Ahrenkiel, Phil, Chowdhury, Subhra, Biswas, Dhrubes, Hubbard, Seth 2023, Growth optimization of quantum-well-enhanced multijunction photovoltaics, Cell Reports Physical Science 4, 101432. 21 June 2023

Upendra, Roshan R., Simon, Richard, Shontz, Suzanne M., and Linte, Cristian A. 2023, Deformable Image Registration Using Vision Transformers for Cardiac Motion Estimation from Cine Cardiac MRI Images, International Conference on Functional Imaging and Modeling of the Heart, 16 June 2023.

Pradhan, Nalinikanta, Kumar, Pardeep, Kanamoto, Rina, Dey, Tarak N., Bhattacharya, M., and Mishra, Pankaj K. 2023, Cavity optomechanical detection of persistent currents and solitons in a bosonic ring condensate, arXiv:2306.06720v1, 11 June 2023.

Mainali, Madan K., Subedi, Indra, Forbes, David V., Hubbard, Seth M., and Poddrazam, Nikolas J. 2023, Optical and electronic transport properties of epitaxial InGaAs and InAlAs in multilayer stacks, Journal of Materials Science, Springer US, Pages 1-14. 07 June 2023

2022

Sindermann, Andrew B., Polly, Stephen J., Guimera Coll, Pablo, Sacchitella, Elijah J., Hubbard, Seth M., et al. 2022, Progress on Substrate Reuse Using Sonic Lift-Off for GaAs- based Photovoltaics, 2022 IEEE 49th Photovoltaics Specialists Conference (PVSC), pp. 1314-1314. 05 June 2022

Kessler-Lewis, Emily, Polly, Stephen J., Sacchitella, Elijah, Hubbard, Seth M., et al. 2022, Demonstration of a Monolithically Integrated Hybrid Electroabsorptive Modulator/Photovoltaic Device for Bidirectional Free Space Optical Communication at 1.55 µm, 2022 IEEE 49th Photovoltaics Specialists Conference (PVSC), pp. 0624-0624. 05 June 2022

D'Rozario, Julia, Polly, Steve, Tatavarti, Rao, and Hubbard, Seth 2022, Thin-Film Multijunction Inverted Metamorphic Solar Cells with Light Management for Space Applications, 2022 IEEE 49th Photovoltaics Specialists Conference (PVSC), pp. 913-913. 05 June 2022

Bogner, Brandon M., Polly, Stephen J., Hubbard, Seth M., and Welser, Roger E. 2022, Thin, Radiation-Resilient III-V PV Devices Utilizing Quantum Structures and Epitaxial Light Reflectors, 2022 IEEE 49th Photovoltaics Specialists Conference (PVSC), pp.1167-1167. 05 June 2022

Sejpal, Rajiv N. and Smith, Bruce W. 2022, Characterizing EMA modelled EUV absorbers for high reflectivity: high phase performance, Proc. SPIE 12051, Optical and EUV Nanolithography XXXV, 120510E, 26 May 2022 doi.org/10.1117/12.2617589

2021

Rubio Rivera, Hector A., van Niekerk, Matthew and Preble, Stefan F. 2021, Silicon Photonic Optical-Electrical-Optical Modulator Neuron Verilog-A Model. JTu3A.125. 10.1364/CLEO_AT.2021.JTu3A.125, 10 May 2021.

Bond, Gregory, Palone, Thomas, van Niekerk, Matthew, Serafini, John, Ciminelli, Mario, Fanto, Michael, and Preble, Stefan, 2021, Direct attachment of optical fibers to photonic integrated circuits with in situ UV curing, 2021 Conference on Lasers and Electro-Optics (CLEO), 2021, pp. 1-2, 29 October 2021.

Scott, R.E., Guo, Z., Sahoo, P.E., Dorrer, C., and Qiao, J., 2021, Comparison of Femtosecond Laser Welding of Transparent Materials at 1030 and 515 nm, Optical Society of America, CLEO: Applications and Technology, ATh2R. 2, 29 October 2021.

Ahrens, Caitlin, Lisse, Carey, Zemcov, Michael, and Runyon, Kirby, 2021, Spectral Science Priorities for an Infrared Spectrometer with Interstellar Probe, Bulletin of the American Astronomical Society, 53, 146, May 2021.

Li, Xiuling, Dejarld, Matthew T., Mohseni, Parsian K., Shin, Jae C.,  Chern, Winston 2021, Metal assisted chemical etching to produce III-V semiconductor nanostructures

2020

Sharma, Sandeep, and Bhattacharya, M., 2020, "Generating quantum superposition states in a levitated nanodiamond," J. Opt. Soc. Am. B 37, 1620-1629 8 May 2020.

Jot, Sumin, Zyarah, Abdullah, Kurinec, Santosh, Zohora, Fatima Tuz, Kudithipudi, Dhireesha, 2020 "FeFET-Based Neuromorphic Architecture with On-Device Feedback Alignment Training" 21st International Symposium on Quality Electronic Design, pp.317-322

Neim, Lilian, Smith, Bruce W., Fenger, Germain, 2020 "EUV mask polarization effects on sub-7nm node imaging" Extreme Ultraviolet Lithoography XI, 1132314

Hasan, Kamrul S. M., Linte, Cristian A., 2020, L-CO-Net: Learned Condensation-Optimization Network for Segmentation and Clinical Parameter Estimation from Cardiac Cine MRI, 2020 42nd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 1217-1220, 10.1109/EMBC44109.2020.9176491, 27 August 2020.

Upendra, Roshan Reddy, Dangi, Shusil, Linte, Cristian A., 2020 "Automated segmentation of cardiac chambers from cine cardiac MRI using an adversarial network architecture" SPIE Medical Imaging, 2020, Houston, Texas, United States

2019

Hach III, Edwin, 2019, Linear optical quantum information processing in silicon nanophotonics, Proc. SPIE 11917, Photonics for Quantum 2019, 1191706, 27 August 2021.

Howland, Gregory, 2019, Efficiently certifying large amounts of entanglement in high-dimensional quantum systems, Proc. SPIE 11917, Photonics for Quantum 2019, 119170X, 27 August 2021.

Preble, Stefan, 2019, Quantum integrated photonics, Proc. SPIE 11917, Photonics for Quantum 2019, 119170A, 27 August 2021.

Zwickl, B., Wysocki, B., Dudley, E., Soltani, M., Tongue, T., and Anant, V., 2019, Career and Education Panel, Proc. SPIE 11917, Photonics for Quantum 2019, 119170C,27 August 2021

Fanto, Mike, 2019, Quantum Integrated Photonics Panel, Proc. SPIE 11917, Photonics for Quantum 2019, 119170O, 27 August 2021.