Publications

2025

Khanal, B. 2025, Towards Robust Deep Learning for Medical Imaging With Limited and Noisy Labeled Data, Rochester Institute of Technology ProQuest Dissertations & Theses, Order No. 32038590, Rochester Institute of Technology, NY, USA, 19 May 2025. 

Legault, A., Alexani, E., Castellanos, R., Evans, C. Figer, D. F., Fullerton, A. W., Garcia, M., Herrero, A., Hillier, D. J., Lennon, D. J., Najarro, P., Negueruela, I., Patrick, L., Puls, J., Rodriguez Del Pino, B., Schoedel, R., and Tramper, F., 2025, Dissecting the Arches cluster: An ideal test bed to study the metal-rich Universe, JWST Proposal. Cycle 4, ID. #7169, 11 March 2025. 

Khanal, B., Pokhrel, S., Bhandari, S., Rana, R., Shrestha, N., Gurung, R. B., Linte, C., Watson, A., Shrestha, Y. R., and Bhattarai B. 2025, Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models, arXiv:2505.07001v1, cs.CV, https://doi.org/10.48550/arXiv.2505.07001, 11 May 2025.

Odden, T. O. B., and Zwickl, B. 2025, How physics students build computational literacy by creating computational literature, Journal of the Learning Sciences, Taylor & Francis Group, LLC​​​​​​​, https://doi.org/10.1080/10508406.2025.2494791, 2 May 2025.

Pina, A. R., El-Adawy, S., Verostek, M., Lewandowski, H. J., Zwickl, B. M. 2025, Investigating Opportunities for Growth and Increased Diversity in Quantum Information Science and Engineering Education in the U.S. based on an Analysis of the Current Educational Landscape, physics.ed-ph, arXiv:2505.00104v1, 30 Apr 2025.

2024

Verostek, M., Miller, C. W. and Zwickl, B. M. 2024, Alleviating the Stress of Finding a PhD Advisor, American Physical Society, Physics Magazine, DOI: 10.1103/Physics.17.76.

Zwickl, Benjamin M., Verostek, Mike, Miller, Casey W. 2024, Modeling when and how physics PhD students search for a research group: the role of interests and prior research experiences in timely group integration, https://arxiv.org/pdf/2404.11580.pdf, 23 April 2024.

Zhang, K., Xiao, K., Luntz-Martin, D., Sun, P., Sharma, S., Bhattacharya, M., and Vamivakas, A. N. 2024, Coherent control of an optical tweezer phonon laser, Opt. Express, 32, 14735-14745, https://doi.org/10.1364/OE.511600, 8 April 2024.

Kundu, Bipasha, Yang, Zixin, Simon, Richard, and Linte, Cristian 2024, Comparative analysis of non-rigid registration techniques for liver surface registration, Proc. SPIE 12928, Medical Imaging 2024: Image-Guided Procedures, Robotic Interventions, and Modeling, 129282B, https://doi.org/10.1117/12.3008594, 29 March 2024.

Silich, E. M., Bellomi, E., Sayers, J., ZuHone, J., Chadayammuri, U., Golwala, S., Hughes, D., Montaña, A., Mroczkowski, T., Nagai, D., Sánchez, D., Stanford, S. A., Wilson, G., Zemcov, M., and Zitrin, A. 2024, Improved Constraints on Mergers with SZ, Hydrodynamical simulations, Optical, and X-ray (ICM-SHOX), Paper II: Galaxy cluster sample overview, EPJ Web of Conferences 293, EDP Sciences, https://doi.org/10.1051/epjconf/202429300050, 28 March 2024.

2023

Khanal, B., Bhattarai, B., Khanal, B., Stoyanov, D., and Linte, C. A. 2023, M-VAAL: Multimodal Variational Adversarial Active Learning for Downstream Medical Image Analysis Tasks, arXiv:2306.12376v1, 21 Jun 2023.

Polly, Stephen, Bogner, Brandon, Fedorenko, Anastasiia, Phokharel, Nikhil, Ahrenkiel, Phil, Chowdhury, Subhra, Biswas, Dhrubes, Hubbard, Seth 2023, Growth optimization of quantum-well-enhanced multijunction photovoltaics, Cell Reports Physical Science 4, 101432. 21 June 2023

Upendra, Roshan R., Simon, Richard, Shontz, Suzanne M., and Linte, Cristian A. 2023, Deformable Image Registration Using Vision Transformers for Cardiac Motion Estimation from Cine Cardiac MRI Images, International Conference on Functional Imaging and Modeling of the Heart, 16 June 2023.

Pradhan, Nalinikanta, Kumar, Pardeep, Kanamoto, Rina, Dey, Tarak N., Bhattacharya, M., and Mishra, Pankaj K. 2023, Cavity optomechanical detection of persistent currents and solitons in a bosonic ring condensate, arXiv:2306.06720v1, 11 June 2023.

Mainali, Madan K., Subedi, Indra, Forbes, David V., Hubbard, Seth M., and Poddrazam, Nikolas J. 2023, Optical and electronic transport properties of epitaxial InGaAs and InAlAs in multilayer stacks, Journal of Materials Science, Springer US, Pages 1-14. 07 June 2023

2022

Deng, Shan, Beyer, Sven, Gong, Xiao, Kurinec, Santosh, Ni, Kai, et al. 2022, Unraveling the dynamics of Charge Trapping and de-Trapping in Ferroelectric FETs, IEEE Transactions on Electron Devices, Volume 69, Number 3, pp. 1503-1511. 28 January 2022

Kurinec, Santosh, and 19 others 2022, Efficiency of Ferroelectric Field-Effect Transistors: An Experimental Study, IEEE Transactions on Electron Devices, volume 69, Number 3. 25 January 2022

Abrand, Alireza, Polly, Stephen J., Manfreda-Schulz, Evan, Hubbard, Seth M., Mohseni, Parsian K., et al. 2022, Localized Self-Assembly of InAs Nanowire Arrays on Reusable Si Substrates for Substrate-Free Optoelectronics, ACS Applied Nano Materials, 10.1021/acsanm.1c03557. 20 January 2022

Kesgin, Muhammet, Murthy, Rajendran, and Lagiewski, Rick 2022, Profiling food festivals by type, name and descriptive content: a population level study, British food Journal, Vol. 124 No. 2, pp. 530-549. doi.org/10.1108/BFJ-04-2021-0412. 14 January 2022

Zohrabi Alaee, Dina, Campbell, Micah K., and Zwickl, Benjamin M. 2022, Impact of virtual research experience for undergraduates experiences on students’ psychosocial gains during the COVID-19 pandemic, Physical Review Physics Education Research, 18, 010101 (2022). 04 January 2022

2021

Bhattacharya, Mishkatul, and Vamivakas, Anthony Nickolas, 2021, Optical Tweezer Phonon Laser, US20210358651A1 18 November 2021

Sejpala, Rajiv, and Smith, Bruce 2021, Identifying extreme ultraviolet lithography attenuated phase shifting mask absorber materials using effective media approximation modeling, Journal of Vacuum Science & Technology B 39, 062604. 16 November 2021

Serafini, J., van Niekerk, M., Fanto, M., and Preble, S. 2021, Tunable, High Purity Two-Photon Interference From Independent Sources On a Silicon Photonic Chip, 2021 IEEE Photonics Conference (IPC), pp. 1-2, doi: 10.1109/IPC48725.2021.9593082, 12 November 2021.

Al Graiti, Saif A., Maywar, and Drew N. 2021, Optical-hysteresis shape transformation using linear polarization components, The Journal of the Optical Society of America B, 11 November 2021.

Swain, Biswa R., Dorrer, Christophe, and Qiao, Jie 2021 Telephoto-lens-based Optical Differentiation Wavefront Sensor for freeform metrology, Opt. Express 29, 38395-38403, 3 November 2021.

2020

Hasan, S. M. Kamrul and Linte, Cristian A. 2020, CondenseUNet: a memory-efficient condensely-connected architecture for bi-ventricular blood pool and myocardium segmentation, Society of Photo-Optical Instrumentation Engineers (SPIE) Conference Series, 11315, 113151J, 5 Apr 2020.

Levinson, Zac A. and Smith, Bruce W. 2020, Lithographic pattern formation in the presence of aberrations in anamorphic optical systems, Society of Photo-Optical Instrumentation Engineers (SPIE) Conference Series, 11323, 113230A, 23 March 2020.

Messineo, Maria, Menten, Karl M., Figer, Donald F., and Clark, J. Simon 2020, Massive Stars in Molecular Clouds Rich in High-energy Sources: The Bridge of G332.809-0.132 and CS 78 in NGC 6334, The Astronomical Journal, 160, 65, 15 July 2020.

Qiao, J., Xu, F., Wu, K., Zhang, S. and Liu, Y. 2020, Multi-Objective Topological Optimization of an Electric Truck Frame Based on Orthogonal Design and Analytic Hierarchy Process, IEEE Access, vol. 8, pp. 140923-140935, 29 July 2020.

Starling, D., Poirier, J., Fanto M., Steidle, J., Tison, C., Howland, G., and Preble, S. 2020, TM Polarized Photon Pair Generation in Linearly Uncoupled Silicon Resonators, in Conference on Lasers and Electro-Optics, OSA Technical Digest (Optica Publishing Group, 2020), paper FTu4C.2, 15 May 2020.

2019

Arteaga-Sierra, F. R., Feng, T., Dorrer, C. and Qiao, J., 2019, Nonlinear Optical Dynamics in Femtosecond Laser Processing of Nd:YAG Waveguides 2019 Conference on Lasers and Electro-Optics Europe & European Quantum Electronics Conference, pp. 1-1, 10.1109, 17 October 2019.

Beichman, C., Zemcov, M. B., Lisse, C. M., Bock, J. A., Brandt, P. C., Horanyi, M., McNutt, R. L., Poppe, A. R., Paul, M. V., Sterken, V. J., and Szalay, J. R., 2019, Measuring the Extragalactic Background Light With an Interstellar Probe, AGU Fall Meeting Abstracts, 2019, SH54A-10, December 2019.

Burns, E., and 1163 colleagues, 2019, A Fermi Gamma-Ray Burst Monitor Search for Electromagnetic Signals Coincident with Gravitational-wave Candidates in Advanced LIGO's First Observing Run, The Astrophysical Journal, 871, 90, 24 January 2019.

Chang, Tzu-Ching, Zemcov, Michael, and 42 colleagues 2019, Tomography of the Cosmic Dawn and Reionization Eras with Multiple Tracers, Bulletin of the American Astronomical Society, 51, 282, 28 Mar 2019.

Mroczkowski, Tony, Zemcov, Michael and 34 colleagues, 2019, A High-resolution SZ View of the Warm-Hot Universe, Bulletin of the American Astronomical Society, 51, 124, May 2019.