Publications

2025

Khanal, B. 2025, Towards Robust Deep Learning for Medical Imaging With Limited and Noisy Labeled Data, Rochester Institute of Technology ProQuest Dissertations & Theses, Order No. 32038590, Rochester Institute of Technology, NY, USA, 19 May 2025. 

Khanal, B., Pokhrel, S., Bhandari, S., Rana, R., Shrestha, N., Gurung, R. B., Linte, C., Watson, A., Shrestha, Y. R., and Bhattarai B. 2025, Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models, arXiv:2505.07001v1, cs.CV, https://doi.org/10.48550/arXiv.2505.07001, 11 May 2025.

Odden, T. O. B., and Zwickl, B. 2025, How physics students build computational literacy by creating computational literature, Journal of the Learning Sciences, Taylor & Francis Group, LLC​​​​​​​, https://doi.org/10.1080/10508406.2025.2494791, 2 May 2025.

Pina, A. R., El-Adawy, S., Verostek, M., Lewandowski, H. J., Zwickl, B. M. 2025, Investigating Opportunities for Growth and Increased Diversity in Quantum Information Science and Engineering Education in the U.S. based on an Analysis of the Current Educational Landscape, physics.ed-ph, arXiv:2505.00104v1, 30 Apr 2025.

Sundaram, V. S. S., Manfreda-Schulz, E., Hawthorne, T., Roberts, T., Palone, T., Deenadayalan, V., Ciminelli, M., Battle, P., Leake, G., Coleman, D., Fanto, M. L., Vamivakas, N., Howland, G. A., and Preble, S. F. 2025, Heralded telecom single photons from a visible–telecom pair source on a hybrid PPKTP–PIC platform, Optica Publishing Group, Optica Quantum, 3, 2, 211-220, https://doi.org/10.1364/OPTICAQ.546774, 22 April 2025. 

2024

Yang, Z., Heiselman, J. S., Han, C., Merrell, K., Simon, R., and Linte, C. A. 2024, Resolving the Ambiguity of Complete-to-Partial Point Cloud Registration for Image-Guided Liver Surgery with Patches-to-Partial Matching, 10.48550/arXiv.2412.19328, 26 December 2024.

Young, O. R., Dolch, T. E., Helmboldt, J. F., Mentrek, C., Dartez, L. P., Lam, M. T., Sosa Fiscella, S. V., Bretl, E., Joyce, C., Loock, J., Meyer, G., Peltzer, A., Petullo, J., Reed, P., Sigtryggsson, E., Bassett, B., Hawken, A. B., Heredia, A. Z., Lettow, P., Lewis, W., Manna, M., Mirochnikoff, N., and Zemcov, M. 2024, Constraining solar emission radius at 42 MHz during the 2024 total solar eclipse using a student-commissioned radio telescope, astro-ph.SR, arXiv:2412.07034v1, 9 Dec 2024.

Jia, Z., Rubio, H., Neim, L., Park, J., Preble, S., and Kanté, B. 2024, Multi-dimensional optical neural network, arXiv physics.optics, arXiv:2411.16140v1, 25 Nov 2024.

Fleming, K. E., Polly, S. J., and Hubbard, S. M. 2024, Improving 2J In0.20Ga0.80As Laser Power Converters for 1064 nm Power Beaming, IEEE, 2024 IEEE 52nd Photovoltaic Specialist Conference (PVSC), Seattle, WA, 10.1109/PVSC57443.2024.10748910, 15 November 2024.

Kundu, B., Khanal, B., Simon, R., and Linte, C. A. 2024, Assessing the Performance of the DINOv2 Self-supervised Learning Vision Transformer Model for the Segmentation of the Left Atrium from MRI Images, Electrical Engineering and Systems Science, Image and Video Processing, arXiv:2411.09598, 14 Nov 2024.

2023

Upendra, R. R., Wentz, B. J., Simon, R., Shontz, S. M., and Linte, C. A. 2023, CNN-Based Cardiac Motion Extraction to Generate Deformable Geometric Left Ventricle Myocardial Models from Cine MRI, Springer Nature Switzerland, LNCS 12738, pp. 253–263, 30 December 2023.

Fedoseyev, A., Herasimenka, S., Sarkisov, S., Bogner, B., Polly, S., and Hubbard, S. 2023, Improving 3-Junction and 2-Junction solar cell efficiency by down-converting solar UV light to visible, J. Phys.: Conf. Ser. 2675 012013, 26 December 2023.

Kessler-Lewis, E., Polly, S. J., Sacchitella, E., Hubbard, S. M., and Hoheisel, R. 2023, Simultaneous Solar Power Generation and Bidirectional Data Transmission, 2023 IEEE 50th Photovoltaic Specialists Conference (PVSC), San Juan, PR, USA, pp. 1-1, doi: 10.1109/PVSC48320.2023.10359826, 25 December 2023.

Shrestha, P., Amgain, S., Khanal, B., Linte, C. A., Bhattarai, B. 2023, Medical Vision Language Pretraining: A survey, Computer Vision and Pattern recognition, arXiv:2312.06224v1, 11 Dec 2023.

Xu, J., Cheng, G., Qiao, J., and Lambropoulos, J. C. 2023, Subsurface damage assessment of femtosecond laser-processed surfaces, SPIE Optifab, Rochester, New York, 29 Nov 2023.

2022

Polly, Stephen, D'Rozario, Julia, Nelson, George, and Hubbard, Seth 2022 Longpass Distributed Bragg Reflector (LPDBR), 22 December 2022

Nassirpour, S., Vahid, A., Do, D.-T., and Bharadia, D. 2022, Control and Placement of Finitie-Resolution Intelligent Surfaces in loT Systems with Imperfect CSI, arXiv preprint arXiv:2212.08631 (2022)

Xiao, Kewen, Pal, Arpita, Sharma, Sandeep, Pettit, R. M., and Bhattacharya, M. 2023 Q-switching of an optical tweezer phonon laser, Journal of Physics B: Atomic, Molecular, and Optical Physics, Volume 55, Number 24, 16 December 2022

Qiao, Jie 2022, Simultaneous Figuring and Finish of Glass and Semiconductor materials Using Femtosecond Lasers, Optica Advanced Photonics Congress 2022, Technical Digest Series, paper LM2B.2. 11 December 2022

Hu, W., Kilinc, M., Gebremichael, W., Dorrer, C., and Qiao, J. 2022, Ultrafast-Laser-Inscribed Type-II Waveguides in IG2 for Mid-Infrared Applications, Optica Advanced Photonics Congress 2022, Technical Digest Series, paper ATh2A.4. 11 December 2022

2021

Borasi, Raffaella, DeMartino, Richard, Harris, Nathan and Miller, Dave 2021, Could COVID-19 be a Catalyst for Disruption in Higher Education?. 10.4324/9781003125921-15, 23 August 2021.

Griston, Molly, Botello, Jesus, Verostek, Michael, and Zwickl, Benjamin 2021, When the light bulb turns on: motivation and collaboration spark the creation of ideas for theoretical physicists. 160-165. 10.1119/perc.2021.pr.Griston. 18 August 2021

Zohrabi, Alaee, Dina, Campbell, Micah K., Zwickl, Benjamin M., 2021, Impact of virtual REU experiences on students' psychosocial gains during the COVID-19 pandemic, eprint arXiv:2108.07620, 17 August 2021

Kesgin, M., Taheri, B., Murthy, R. S., Decker, J. and Gannon, M. J. 2021, Making memories: a consumer-based model of authenticity applied to living history sites, International Journal of Contemporary Hospitality Management, Vol. 33 No. 10, pp. 3610-3635, 16 August 2021. 

Verostek, Michael, Miller, Casey, and Zwickl, Benjamin 2021, Time to PhD completion is no different between men and women despite score gap on physics GRE. 414-419. 10.1119/perc.2021.pr.Verostek. 12 August 2021

2020

Mohammadi, F., Dangi, S., Shontz, S.M., and Linte, C. A., 2020, A Direct High-Order Curvilinear Triangular Mesh Generation Method Using an Advancing Front Technique. In: Krzhizhanovskaya V. et al. (eds) Computational Science – ICCS 2020. ICCS 2020. Lecture Notes in Computer Science, vol 12138. Springer, Cham. https://doi.org/10.1007/978-3-030-50417-5_6, 15 June 2020.

Hartensveld, M., Melanson, B., and Zhang, J., 2020. Electrostatic field effect light-emitting diode. IEEE Photonics Journal, 12(3), 1-8, 04 May 2020

Oram, Kathleen and Ninkov, Zoran, 2020. Digital micromirror device enabled integral field spectroscopy with the Hadamard transform technique. 87. 10.1117/12.2563207, 13 December 2020.

Owens, Lindsay M., Zwickl, Benjamin M., Franklin, Scott V., Miller, Casey W., 2020 "Physics GRE Requirements Create Uneven Playing Field for Graduate Applicants"  Physics Education Research Conference NSF: 10310048

Chen, Genyu et al., 2020, "Photomixing THz Generation from Nitrogen-Ion–Implanted GaAs Metal-Semiconductor-Metal Diodes Enhanced by a Bragg Mirror," 2020 45th International Conference on Infrared, Millimeter, and Terahertz Waves (IRMMW-THz), pp. 1-2, doi: 10.1109/IRMMW-THz46771.2020.9370390.

2019

Cooray, Asantha, Chang, Tzu-Ching, Unwin, Stephen, Zemcov, Michael, Coffey, Andrew, Morrissey, Patrick, Raouf, Nasrat, Lipscy, Sarah, Shannon, Mark, Wu, Gordon, Cen, Renyue, Ram Chary, Ranga, Dore, Olivie, Fan, Xiaohui, Faxio, Giovanni G., Finkelstein, Steven L., Heneka, Caroline, Lee, Bomee, Linden, Philip, Nayyeri, Hooshang, Rhodes, Jason, Sadoun, Raphael, Silva, Marta B., Trac, Hy, Wu, Hao-Yi, and Zheng, Zheng, 2019, CDIM: Cosmic Dawn Intensity Mapper Final Report 2019, arXiv: 1903.03144 [astro-ph.GA].


Sayers, Jack, Montana, Alfredo, Mroczkowski, Tony, Wilson, Grant W., Zemcov, Michael, Zitrin, Adi, Cibirka, Nathalia, Golwala, Sunil, Hughes, David, Nagai, Daisuke, Reese, Erik D., Sanchez, David, and Zuhone, John, 2019 Imaging the Thermal and Kinematic Sunyaev-Zel'dovich Effect Signals in a Sample of 10 Massive Galaxy Clusters: Constraints on Internal Velocity Structures and Bulk Velocities, The Astrophysical Journal, Volume 880, Number 1, July 2019.

Chary, Ranga-Ram, Carey, Sean, Hora, Joe, Ashby, Matthew, Fazio, Giovanni, Willner, Steven, Lowrance, Patrick, Krick, Jessica, Glaccum, Bill, Laine, Seppo, Matsuura, Shuji, Takahashi, Aoi, Ootsubo, Takafumi, Zemcov, Michael, Cooray, Asantha, Ingalls, Jim, Lau, Ryan, Tsumura, Kohji, Sano, Kei, and Gorjian, Varoujan, 2019, Placing New Observational Constraints on the Structure of the Zodiacal Dust with the Spitzer/IRAC Shutter 2019, Spitzer Proposal ID #14269, May 2019.


Brandt, P. C., McNutt, R. L., Paul, M. V., Mandt, K. E., Lisse, C. M., Zemcov, M., Beichman, C. A., Provornikova, E. A., Runyon, K. D., and Rymer, A. M., 2019, Interstellar Probe: A Cross-Divisional Mission in to the Galaxy, Proceedings of The Space and Astrophysics landscape for the 2020s and Beyond, No. 2135, id. 5053, April 2019


Farrah, Duncan, Ennico Smith, Kimberly, Ardila, David, Bradford, Charles M., DiPirro, Michael J., Ferkinhoff, Carl., Glenn, Jason, Goldsmith, Paul F., Leisawitz, David T., Nikola, Thomas, Rangwala, Naseem, Rinehart, Stephen A., Staguhn, Johannes G., Zemcov, Michael, Zmuidzinas, Jonas, Bartlett, James, Carey, Sean J., Fischer, William J., Kamenetzky, Julia R., Kartaltepe, Jeyhan, Lacy, Mark D., Lis, Dariusz C., Locke, Lisa S., Lopez-Rodriguez, Enrique, MacGregor, Meredith, Mills, Elisabeth, Moseley, Samuel H., Murphy, Eric J., Rhodes, Alan, Richter, Matthew J., Rigopoulou, Dimitra, Sanders, David B., Sankrit, Ravi, Savini, Giorgio, Smith, John-David, and Stierwalt, Sabrina, 2019, Far-Infrared Instrumentation and Technological Development for the Next Decade, SPIE Journal of Astronomical Telescopes, Instruments, and Systems, Volume 5, Issue 2, 5 April 2019.