Publications

2025

Khanal, B. 2025, Towards Robust Deep Learning for Medical Imaging With Limited and Noisy Labeled Data, Rochester Institute of Technology ProQuest Dissertations & Theses, Order No. 32038590, Rochester Institute of Technology, NY, USA, 19 May 2025. 

Khanal, B., Pokhrel, S., Bhandari, S., Rana, R., Shrestha, N., Gurung, R. B., Linte, C., Watson, A., Shrestha, Y. R., and Bhattarai B. 2025, Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models, arXiv:2505.07001v1, cs.CV, https://doi.org/10.48550/arXiv.2505.07001, 11 May 2025.

Legault, A., Alexani, E., Castellanos, R., Evans, C. Figer, D. F., Fullerton, A. W., Garcia, M., Herrero, A., Hillier, D. J., Lennon, D. J., Najarro, P., Negueruela, I., Patrick, L., Puls, J., Rodriguez Del Pino, B., Schoedel, R., and Tramper, F., 2025, Dissecting the Arches cluster: An ideal test bed to study the metal-rich Universe, JWST Proposal. Cycle 4, ID. #7169, 11 March 2025. 

Odden, T. O. B., and Zwickl, B. 2025, How physics students build computational literacy by creating computational literature, Journal of the Learning Sciences, Taylor & Francis Group, LLC​​​​​​​, https://doi.org/10.1080/10508406.2025.2494791, 2 May 2025.

Pina, A. R., El-Adawy, S., Verostek, M., Lewandowski, H. J., Zwickl, B. M. 2025, Investigating Opportunities for Growth and Increased Diversity in Quantum Information Science and Engineering Education in the U.S. based on an Analysis of the Current Educational Landscape, physics.ed-ph, arXiv:2505.00104v1, 30 Apr 2025.

2024

Yang, Z., Heiselman, J. S., Han, C., Merrell, K., Simon, R., and Linte, C. A. 2024, Resolving the Ambiguity of Complete-to-Partial Point Cloud Registration for Image-Guided Liver Surgery with Patches-to-Partial Matching, 10.48550/arXiv.2412.19328, 26 December 2024.

Young, O. R., Dolch, T. E., Helmboldt, J. F., Mentrek, C., Dartez, L. P., Lam, M. T., Sosa Fiscella, S. V., Bretl, E., Joyce, C., Loock, J., Meyer, G., Peltzer, A., Petullo, J., Reed, P., Sigtryggsson, E., Bassett, B., Hawken, A. B., Heredia, A. Z., Lettow, P., Lewis, W., Manna, M., Mirochnikoff, N., and Zemcov, M. 2024, Constraining solar emission radius at 42 MHz during the 2024 total solar eclipse using a student-commissioned radio telescope, astro-ph.SR, arXiv:2412.07034v1, 9 Dec 2024.

Jia, Z., Rubio, H., Neim, L., Park, J., Preble, S., and Kanté, B. 2024, Multi-dimensional optical neural network, arXiv physics.optics, arXiv:2411.16140v1, 25 Nov 2024.

Fleming, K. E., Polly, S. J., and Hubbard, S. M. 2024, Improving 2J In0.20Ga0.80As Laser Power Converters for 1064 nm Power Beaming, IEEE, 2024 IEEE 52nd Photovoltaic Specialist Conference (PVSC), Seattle, WA, 10.1109/PVSC57443.2024.10748910, 15 November 2024.

Kundu, B., Khanal, B., Simon, R., and Linte, C. A. 2024, Assessing the Performance of the DINOv2 Self-supervised Learning Vision Transformer Model for the Segmentation of the Left Atrium from MRI Images, Electrical Engineering and Systems Science, Image and Video Processing, arXiv:2411.09598, 14 Nov 2024.

2023

Upendra, R. R., Wentz, B. J., Simon, R., Shontz, S. M., and Linte, C. A. 2023, CNN-Based Cardiac Motion Extraction to Generate Deformable Geometric Left Ventricle Myocardial Models from Cine MRI, Springer Nature Switzerland, LNCS 12738, pp. 253–263, 30 December 2023.

Fedoseyev, A., Herasimenka, S., Sarkisov, S., Bogner, B., Polly, S., and Hubbard, S. 2023, Improving 3-Junction and 2-Junction solar cell efficiency by down-converting solar UV light to visible, J. Phys.: Conf. Ser. 2675 012013, 26 December 2023.

Kessler-Lewis, E., Polly, S. J., Sacchitella, E., Hubbard, S. M., and Hoheisel, R. 2023, Simultaneous Solar Power Generation and Bidirectional Data Transmission, 2023 IEEE 50th Photovoltaic Specialists Conference (PVSC), San Juan, PR, USA, pp. 1-1, doi: 10.1109/PVSC48320.2023.10359826, 25 December 2023.

Shrestha, P., Amgain, S., Khanal, B., Linte, C. A., Bhattarai, B. 2023, Medical Vision Language Pretraining: A survey, Computer Vision and Pattern recognition, arXiv:2312.06224v1, 11 Dec 2023.

Xu, J., Cheng, G., Qiao, J., and Lambropoulos, J. C. 2023, Subsurface damage assessment of femtosecond laser-processed surfaces, SPIE Optifab, Rochester, New York, 29 Nov 2023.

2022

Guaniodis, Peter T., Murthy, Rajendran S., and Ettlie, John E. 2022, How Do External Networks and Strategic Targeting Impact Open Innovation in the Global Auto Industry, IEEE Transactions on Engineering Management, 2022, doi: 10.1109/TEM.2022.3183540. 06 July 2022

Zohrabi Alaee, Dina, and Zwickl, Benjamin M. 2022, Toward a Longitudinal Multifaceted view of Remote Undergraduate Research Experiences During the COVID-19 Pandemic: The perspectives of doing research online, arXiv:2207.02733 01 July 2022

Bennett, Ridge, Zohrabi Alaee, dina, and Zwickl, Benjamin M. 2022, Analysis of Physics Students' Subfield Career Decision-Making Using Social Cognitive Career Theory, Physics Education Research Conference NSF: 10409046. 01 July 2022

Kabir, Muhammad S., Manley, Robert G., Hirschman, Karl D. 2022, Temperature Dependence of Intrinsic Channel Mobility in Indium-Gallium-Zinc-Oxide TFTs, IEEE Electron Device Letters, Volume 43, Issue 8. 14 June 2022

D'Rozario, Julia, Polly, Steve, Tatavarti, Rao, and Hubbard, Seth 2022, Thin-Film Multijunction Inverted Metamorphic Solar Cells with Light Management for Space Applications, 2022 IEEE 49th Photovoltaics Specialists Conference (PVSC), pp. 913-913. 05 June 2022

2021

Rubio Rivera, Hector A., van Niekerk, Matthew and Preble, Stefan F. 2021, Silicon Photonic Optical-Electrical-Optical Modulator Neuron Verilog-A Model. JTu3A.125. 10.1364/CLEO_AT.2021.JTu3A.125, 10 May 2021.

Bond, Gregory, Palone, Thomas, van Niekerk, Matthew, Serafini, John, Ciminelli, Mario, Fanto, Michael, and Preble, Stefan, 2021, Direct attachment of optical fibers to photonic integrated circuits with in situ UV curing, 2021 Conference on Lasers and Electro-Optics (CLEO), 2021, pp. 1-2, 29 October 2021.

Scott, R.E., Guo, Z., Sahoo, P.E., Dorrer, C., and Qiao, J., 2021, Comparison of Femtosecond Laser Welding of Transparent Materials at 1030 and 515 nm, Optical Society of America, CLEO: Applications and Technology, ATh2R. 2, 29 October 2021.

Ahrens, Caitlin, Lisse, Carey, Zemcov, Michael, and Runyon, Kirby, 2021, Spectral Science Priorities for an Infrared Spectrometer with Interstellar Probe, Bulletin of the American Astronomical Society, 53, 146, May 2021.

Li, Xiuling, Dejarld, Matthew T., Mohseni, Parsian K., Shin, Jae C.,  Chern, Winston 2021, Metal assisted chemical etching to produce III-V semiconductor nanostructures

2020

Sharma, Sandeep, and Bhattacharya, M., 2020, "Generating quantum superposition states in a levitated nanodiamond," J. Opt. Soc. Am. B 37, 1620-1629 8 May 2020.

Jot, Sumin, Zyarah, Abdullah, Kurinec, Santosh, Zohora, Fatima Tuz, Kudithipudi, Dhireesha, 2020 "FeFET-Based Neuromorphic Architecture with On-Device Feedback Alignment Training" 21st International Symposium on Quality Electronic Design, pp.317-322

Neim, Lilian, Smith, Bruce W., Fenger, Germain, 2020 "EUV mask polarization effects on sub-7nm node imaging" Extreme Ultraviolet Lithoography XI, 1132314

Upendra, Roshan Reddy, Dangi, Shusil, Linte, Cristian A., 2020 "Automated segmentation of cardiac chambers from cine cardiac MRI using an adversarial network architecture" SPIE Medical Imaging, 2020, Houston, Texas, United States

Liu, Dawei, Dangi, Shusil, Schwarz, Karl Q., Linte, Cristian A., 2020 "Combining statistical shape model and principal component analysis to estimate left ventricular volume and ejection fraction" SPIE Medical Imaging, 2020, Houston, Texas, United States

2019

Cooray, Asantha, Chang, Tzu-Ching, Unwin, Stephen, Zemcov, Michael, Coffey, Andrew, Morrissey, Patrick, Raouf, Nasrat, Lipscy, Sarah, Shannon, Mark, Wu, Gordon, Cen, Renyue, Ram Chary, Ranga, Dore, Olivie, Fan, Xiaohui, Faxio, Giovanni G., Finkelstein, Steven L., Heneka, Caroline, Lee, Bomee, Linden, Philip, Nayyeri, Hooshang, Rhodes, Jason, Sadoun, Raphael, Silva, Marta B., Trac, Hy, Wu, Hao-Yi, and Zheng, Zheng, 2019, CDIM: Cosmic Dawn Intensity Mapper Final Report 2019, arXiv: 1903.03144 [astro-ph.GA].


Sayers, Jack, Montana, Alfredo, Mroczkowski, Tony, Wilson, Grant W., Zemcov, Michael, Zitrin, Adi, Cibirka, Nathalia, Golwala, Sunil, Hughes, David, Nagai, Daisuke, Reese, Erik D., Sanchez, David, and Zuhone, John, 2019 Imaging the Thermal and Kinematic Sunyaev-Zel'dovich Effect Signals in a Sample of 10 Massive Galaxy Clusters: Constraints on Internal Velocity Structures and Bulk Velocities, The Astrophysical Journal, Volume 880, Number 1, July 2019.

Chary, Ranga-Ram, Carey, Sean, Hora, Joe, Ashby, Matthew, Fazio, Giovanni, Willner, Steven, Lowrance, Patrick, Krick, Jessica, Glaccum, Bill, Laine, Seppo, Matsuura, Shuji, Takahashi, Aoi, Ootsubo, Takafumi, Zemcov, Michael, Cooray, Asantha, Ingalls, Jim, Lau, Ryan, Tsumura, Kohji, Sano, Kei, and Gorjian, Varoujan, 2019, Placing New Observational Constraints on the Structure of the Zodiacal Dust with the Spitzer/IRAC Shutter 2019, Spitzer Proposal ID #14269, May 2019.


Brandt, P. C., McNutt, R. L., Paul, M. V., Mandt, K. E., Lisse, C. M., Zemcov, M., Beichman, C. A., Provornikova, E. A., Runyon, K. D., and Rymer, A. M., 2019, Interstellar Probe: A Cross-Divisional Mission in to the Galaxy, Proceedings of The Space and Astrophysics landscape for the 2020s and Beyond, No. 2135, id. 5053, April 2019


Farrah, Duncan, Ennico Smith, Kimberly, Ardila, David, Bradford, Charles M., DiPirro, Michael J., Ferkinhoff, Carl., Glenn, Jason, Goldsmith, Paul F., Leisawitz, David T., Nikola, Thomas, Rangwala, Naseem, Rinehart, Stephen A., Staguhn, Johannes G., Zemcov, Michael, Zmuidzinas, Jonas, Bartlett, James, Carey, Sean J., Fischer, William J., Kamenetzky, Julia R., Kartaltepe, Jeyhan, Lacy, Mark D., Lis, Dariusz C., Locke, Lisa S., Lopez-Rodriguez, Enrique, MacGregor, Meredith, Mills, Elisabeth, Moseley, Samuel H., Murphy, Eric J., Rhodes, Alan, Richter, Matthew J., Rigopoulou, Dimitra, Sanders, David B., Sankrit, Ravi, Savini, Giorgio, Smith, John-David, and Stierwalt, Sabrina, 2019, Far-Infrared Instrumentation and Technological Development for the Next Decade, SPIE Journal of Astronomical Telescopes, Instruments, and Systems, Volume 5, Issue 2, 5 April 2019.