Publications

2025

Poudel, N., Yang, Z., Merrell, K., Simon, R., and Linte, C. A. 2025, Toward Patient-specific Partial Point Cloud to Surface Completion for Pre- to Intra-operative Registration in Image-guided Liver Interventions, arXiv:2505.19518v1, cs.CV, 26 May 2025.

Chichester, C. C., Yamakuchi, M.,Takenouchi, K., Hashiguchi, T., and Maywar, D. N. 2025, Analytical Basal-State Model of the Glucose, Insulin, and C-Peptide Systems for Type 2 Diabetes, MDPI, Bioengineering, 12(5), 553, https://doi.org/10.3390/bioengineering12050553, 21 May 2025.

Khanal, B. 2025, Towards Robust Deep Learning for Medical Imaging With Limited and Noisy Labeled Data, Rochester Institute of Technology ProQuest Dissertations & Theses, Order No. 32038590, Rochester Institute of Technology, NY, USA, 19 May 2025. 

Legault, A., Alexani, E., Castellanos, R., Evans, C. Figer, D. F., Fullerton, A. W., Garcia, M., Herrero, A., Hillier, D. J., Lennon, D. J., Najarro, P., Negueruela, I., Patrick, L., Puls, J., Rodriguez Del Pino, B., Schoedel, R., and Tramper, F., 2025, Dissecting the Arches cluster: An ideal test bed to study the metal-rich Universe, JWST Proposal. Cycle 4, ID. #7169, 11 March 2025. 

Khanal, B., Pokhrel, S., Bhandari, S., Rana, R., Shrestha, N., Gurung, R. B., Linte, C., Watson, A., Shrestha, Y. R., and Bhattarai B. 2025, Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models, arXiv:2505.07001v1, cs.CV, https://doi.org/10.48550/arXiv.2505.07001, 11 May 2025.

2024

Verostek, M., Miller, C. W. and Zwickl, B. M. 2024, Alleviating the Stress of Finding a PhD Advisor, American Physical Society, Physics Magazine, DOI: 10.1103/Physics.17.76.

Zwickl, Benjamin M., Verostek, Mike, Miller, Casey W. 2024, Modeling when and how physics PhD students search for a research group: the role of interests and prior research experiences in timely group integration, https://arxiv.org/pdf/2404.11580.pdf, 23 April 2024.

Zhang, K., Xiao, K., Luntz-Martin, D., Sun, P., Sharma, S., Bhattacharya, M., and Vamivakas, A. N. 2024, Coherent control of an optical tweezer phonon laser, Opt. Express, 32, 14735-14745, https://doi.org/10.1364/OE.511600, 8 April 2024.

Kundu, Bipasha, Yang, Zixin, Simon, Richard, and Linte, Cristian 2024, Comparative analysis of non-rigid registration techniques for liver surface registration, Proc. SPIE 12928, Medical Imaging 2024: Image-Guided Procedures, Robotic Interventions, and Modeling, 129282B, https://doi.org/10.1117/12.3008594, 29 March 2024.

Silich, E. M., Bellomi, E., Sayers, J., ZuHone, J., Chadayammuri, U., Golwala, S., Hughes, D., Montaña, A., Mroczkowski, T., Nagai, D., Sánchez, D., Stanford, S. A., Wilson, G., Zemcov, M., and Zitrin, A. 2024, Improved Constraints on Mergers with SZ, Hydrodynamical simulations, Optical, and X-ray (ICM-SHOX), Paper II: Galaxy cluster sample overview, EPJ Web of Conferences 293, EDP Sciences, https://doi.org/10.1051/epjconf/202429300050, 28 March 2024.

2023

Khanal, B., Bhattarai, B., Khanal, B., Stoyanov, D., and Linte, C. A. 2023, M-VAAL: Multimodal Variational Adversarial Active Learning for Downstream Medical Image Analysis Tasks, arXiv:2306.12376v1, 21 Jun 2023.

Polly, Stephen, Bogner, Brandon, Fedorenko, Anastasiia, Phokharel, Nikhil, Ahrenkiel, Phil, Chowdhury, Subhra, Biswas, Dhrubes, Hubbard, Seth 2023, Growth optimization of quantum-well-enhanced multijunction photovoltaics, Cell Reports Physical Science 4, 101432. 21 June 2023

Upendra, Roshan R., Simon, Richard, Shontz, Suzanne M., and Linte, Cristian A. 2023, Deformable Image Registration Using Vision Transformers for Cardiac Motion Estimation from Cine Cardiac MRI Images, International Conference on Functional Imaging and Modeling of the Heart, 16 June 2023.

Pradhan, Nalinikanta, Kumar, Pardeep, Kanamoto, Rina, Dey, Tarak N., Bhattacharya, M., and Mishra, Pankaj K. 2023, Cavity optomechanical detection of persistent currents and solitons in a bosonic ring condensate, arXiv:2306.06720v1, 11 June 2023.

Mainali, Madan K., Subedi, Indra, Forbes, David V., Hubbard, Seth M., and Poddrazam, Nikolas J. 2023, Optical and electronic transport properties of epitaxial InGaAs and InAlAs in multilayer stacks, Journal of Materials Science, Springer US, Pages 1-14. 07 June 2023

2022

Gebremichael, Wendwesen H., Dorrer, Christophe, and Qiao, Jie 2022, Comparative study of Nd:YAG waveguide lasers inscribed with visible and near-IR femtosecond laser sources, Proc. SPIE PC11988, Laser Applications in Microelectronic and Optoelectronic Manufacturing. 01 April 2022

D'Rozario, Julia, Polly, Steve, Tatavarti, Rao, and Hubbard, Seth 2022, Light management for improved photon absorption in thin-film radiation-tolerant multijunction space photovoltaics, Proc. SPIE 11996, Physics, Simulation, and Photonic Engineering of Photovoltaic Devices XI, 1199605. 04 March 2022

Linte, Crisitian A., and Siewerdsen, Jeffrey H. 2022, Image-guided Procedures, Robotic Interventions, and Modeling, Proceedings of SPIE, Medical Imaging 2022. 20 February 2022.

Hudson, Andrew, Hubbard, Seth, Juang, Bor-Chau, Debnath, Mukul, Lotshaw, William, et al. 2022, Electron radiation effects on carrier relaxation in molecular beam and vapor deposition grown GaAs test structures, Journal of Applied Physics 131, 075703. 18 February 2022.

D’Rozario, Julia R., Polly, Stephen J., Nelson, George T., Wilt, David, and Hubbard, Seth M., 2022, Modeling free-carrier absorption in ultrathin III-V solar cells with light management, Optics Express Vol. 30, Issue 5, pp. 7096-7109. 01 February 2022

2021

Yang, Zixin, Simon, Richard, Li, Yangming, and Linte, Cristian A. 2021, Dense Depth Estimation from Stereo Endoscopy Videos Using Unsupervised Optical Flow Methods, Medical Image Understanding and Analysis. MIUA 2021. Lecture Notes in Computer Science, vol 12722, 6 July 2021.

Hasan, Nazmul M. D., Zheng, Yixiong, Lai, Junyu, Mohseni, Parsian K., Seo, Jung-Hun, et al. 2021, Electrical and Thermal Property of Si/GaAs Heterojunction Formed by Ultra-Thin Oxide Interfacial Layer, arXiv, eprint arXiv:2107.06983, 01 July 2021

Sun, G., Chang, T. C., Uzgil, B. D., Bock, J. J., Bradford, C. M., Butler, V., Caze-Cortes, T., Cheng, Y. T., Cooray, A. 2021, Probing Cosmic Reionization and Molecular Gas Growth with TIME, The Astrophysical Journal, Volume 915, Number 1, 01 July 2021.

Swain, Biswa R., Dorrer, Christophe, and Qiao, Jie 2021, Telephoto-Based Optical Differentiation Wavefront Sensor and Alignment Tolerance for Freeform Metrology, Optical Society of America, Optical Fabrication and Testing, Pages OM3B. 4, 27 June 2021.

Birrittella, Richard J., Ziskind, Jason, Hach, Edwin E., Alsing, Paul M., and Gerry, Christopher C. 2021, Optimal spin- and planar-quantum squeezing in superpositions of spin coherent states, eprint arXiv:2106.04430. 25 June 2021

2020

Serafini, J., Spiecker, D. Steidle, J., Fanto, M., Hach, E., and Preble, S., 2020, Two photon interference via coupled ring resonators on a silicon photonic chip, Conference on Lasers and Electro-Optics, OSA Technical Digest (Optical Society of America, 2020), paper FTu4C.7.

Sun, G., Bock, J., Bradford, M., Butler, V., Chang, T., Cheng, Y., Cooray, A., Crites, A., Hailey-Dunsheath, S., Hunacek, J., Keenan, R., Li, C., Marrone, D., Moncelsi, L., Shirokoff, E., Trumper, I., Uzgil, B., and Zemcov, M., 2020, Probing Cosmic Reionization and Molecular Gas Growth with TIME, American Astronomical Society Meeting Abstracts #235, 235, 266.02, 16 Dec 2020.

van Niekerk, M., Starling, D. J., Howland, G. A., Leake, G., Antohe, A., Binti, S., Coleman, D., Smith, A. M., Tison, C. C., Fanto, M. L., and Preble, S. F., 2020, "Experimental Evolutionary Optimization of an Active Multimode Interferometer", 2020 Conference on Lasers and Electro-Optics (CLEO), San Jose, CA, USA, 2020, pp. 1-2. 10 September 2020.

Donlon, Kevan, Ninkov, Zoran, and Baum, Stefi, 2020, Astrometric errors introduced by interpixel capacitive coupling in hybridized arrays, Journal of Astronomical Telescopes, Instruments, and Systems, 6, 011006, 9 January 2020.

Figer, D. F. and Gallagher, J. 2020, Characterization of a Single Photon Sensing Detector for Astrophysics, American Astronomical Society Meeting Abstracts, 150.02, January 2020.

2019

Serna, Samuel, Preble, Stefan, and 28 colleagues, 2019, A modular laboratory curriculum for teaching integrated photonics to students with diverse backgrounds, Fifteenth Conference on Education and Training in Optics and Photonics: ETOP 2019, 11143, 111431C, 2 July 2019.

van Niekerk, Matthew, Steidle, Jeffrey A., Howland, Gregory A., Fanto, Michael L., Soures, Nicholas, Zohora, Fatima Tuz, Kudithipudi, Dhireesha, and Preble, Stefan F., 2019, Approximating large scale arbitrary unitaries with integrated multimode interferometers, Quantum Information Science, Sensing, and Computation XI, 10984, 109840J, 13 May 2019.

Wang, Yun, and 39 colleagues 2019, ATLAS probe: Breakthrough science of galaxy evolution, cosmology, Milky Way, and the Solar System, Publications of the Astronomical Society of Australia, 36, e015, 30 Aug 2019.

Zemcov, Michael, Symons, Teresa, and 23 colleagues, 2019, Opportunities for Astrophysical Science from the Inner and Outer Solar System, Bulletin of the American Astronomical Society, 51, 60,  13 Mar 2019.

Basu, Kaustuv, Zemcov, Michael and 32 colleagues, 2019, "SZ spectroscopy" in the coming decade: Galaxy cluster cosmology and astrophysics in the submillimeter, Bulletin of the American Astronomical Society, 51, 302, 12 Mar 2019.