Publications

2025

Poudel, N., Yang, Z., Merrell, K., Simon, R., and Linte, C. A. 2025, Toward Patient-specific Partial Point Cloud to Surface Completion for Pre- to Intra-operative Registration in Image-guided Liver Interventions, arXiv:2505.19518v1, cs.CV, 26 May 2025.

Chichester, C. C., Yamakuchi, M.,Takenouchi, K., Hashiguchi, T., and Maywar, D. N. 2025, Analytical Basal-State Model of the Glucose, Insulin, and C-Peptide Systems for Type 2 Diabetes, MDPI, Bioengineering, 12(5), 553, https://doi.org/10.3390/bioengineering12050553, 21 May 2025.

Khanal, B. 2025, Towards Robust Deep Learning for Medical Imaging With Limited and Noisy Labeled Data, Rochester Institute of Technology ProQuest Dissertations & Theses, Order No. 32038590, Rochester Institute of Technology, NY, USA, 19 May 2025. 

Legault, A., Alexani, E., Castellanos, R., Evans, C. Figer, D. F., Fullerton, A. W., Garcia, M., Herrero, A., Hillier, D. J., Lennon, D. J., Najarro, P., Negueruela, I., Patrick, L., Puls, J., Rodriguez Del Pino, B., Schoedel, R., and Tramper, F., 2025, Dissecting the Arches cluster: An ideal test bed to study the metal-rich Universe, JWST Proposal. Cycle 4, ID. #7169, 11 March 2025. 

Khanal, B., Pokhrel, S., Bhandari, S., Rana, R., Shrestha, N., Gurung, R. B., Linte, C., Watson, A., Shrestha, Y. R., and Bhattarai B. 2025, Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models, arXiv:2505.07001v1, cs.CV, https://doi.org/10.48550/arXiv.2505.07001, 11 May 2025.

2024

Deenadayalan V., Preble S., Howland G., Schulz E., Scalzi K., Alsing P., Asagodu P., Barton N., Brownell A., Craft C., Fanto M., Hucul D., Klug A., Macalik M., Percevault G., Porto N., Rizzo A., Schneeloch J., Sheridan E., Sundaram V., Smith A., Smith Z., Tison C., and Soderberg K. 2024,  Progress Towards Trapping and Cooling of Barium-133, 55th Annual Meeting of the APS Division of Atomic, Molecular and Optical Physics, Fort Worth, Texas, 6 June 2024.

Howland G., Preble S., Schulz E., Smith Z., Alsing P., Asagodu P., Barton N., Birrittella R., Brownell A., Craft C., Deenadayalan V., Fanto M., Hucul D., Hummel D., Klug A., Macalik M., Mathers C., Rizzo A., Scalzi K., Schneeloch J., Sundaram V., Smith A., Tison C., and Soderberg K. 2024, Towards a Barium Trapped-Ion System Onboard an UAS, 55th Annual Meeting of the APS Division of Atomic, Molecular and Optical Physics, Fort Worth, Texas, 5 June 2024

Nie, R., Filippini, J., Brooks, E., Barry, P., Connors, J., Gradziel, M., Mercado, D., Razavimaleki, V., Shirokoff, E., Spencer, L., Tramm, S., Trappe, N., and Zemcov, M. 2024, A Vacuum Waveguide Filter Bank Spectrometer for Far-Infrared Astrophysics, J Low Temp Phys, https://doi.org/10.1007/s10909-024-03166-2, 05 June 2024.

Deenadayalan, V., Howland, G., Manfreda-Schulz, E., Preble, S., Sundaram, V., Klug, A., Alsing, P., Asagodu, P., Barton, N., Brownell, A., Craft, C., Fanto, M., Hucul, D., Macalik, M., Percevault, G., Porto, N., Rizzo, A., Scalzi, K., Schneeloch, J., Sheridan, E., Smith, A., Tison, C., and Soderberg, K. 2024, Silicon-Nitride Waveguide Splitter for Light Delivery to High-Fidelity Matter Qubits, 55th Annual Meeting of the APS Division of Atomic, Molecular and Optical Physics, Fort Worth, Texas, 5 June 2024.

Preble S., Fahrenkopf N., Hucul D., Morgan A., Park S.B., Shabani J., and Slaughter J., 2024, Packaging Challenges for Emerging Semiconductor Technologies, IEEE Electronics Packaging Society, May 2024.

2023

Verostek, M, Miller, Casey W., and Zwickl, Benjamin M. 2023, Inequities and misaligned expectation in PhD students' search for a research group arxiv.org/2307.07008, Physics ed-ph, 13 July 2023

Kessler-Lewis, Emily S., Polly, Stephen J., Nelson, George T., Slocum, Michael A., Pokharel, Nikhil, Ahrenkiel, Phil, and Hubbard, Seth M. 2023, Development of MOVPE grown GaSb-on-GaAs interfacial misfit solar cells, Journal of Applied Physics 133, 28 June 2023.

Alaee, Dina Z., Tonry, Keegan S., and Zwickl, Benjamin M. 2023, Analyzing Physics Majors’ Specialization Low Interest Using Social Cognitive Career Theory, arXiv:2306.15023v1, 26 Jun 2023.

Tennant, Bryce A., and Maywar, Drew N. 2023, Analytical model of direct-Bragg, exchange-Bragg, and evanescent coupling in a dual-waveguide structure and its application to single-mode lasing, J. Opt. Soc. Am. B 40, 1815-1829, 23 June 2023.

Zemcov, M. 2023, Cold, Small, and Plentiful: the Future of Instrumentation for Far-IR Astrophysics, Bulletin of the AAS. 55, 6 (AAS242 Abstracts) 01 July 2023

2022

Spaulding, Carolyn, Taylor, Alex, Williams, Scott, Packard, Glenn, and, Kurinec, Santosh 2022, Introducing gallium in silicon and thin film polysilicon using self assembled monolayer doping, Materials Letters, Volume 325. 14 July 2022

Kamrul Hasan, S. M., and Linte, Cristian A. 2022, Joint Segmentation and uncertainty Estimation of Ventricular Structures from Cardiac MRI using a Bayesian CondenseUNet, 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC) 11 July 2022

Upendra, Roshan Reddy, and Linte, Cristian A. 2022, A 3D Convolutional Neural Network with Gradient Guidance for Image Super-Resolution of Late Gadolinium Enhanced cardiac MRI, 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), Glasgow, Scotland, United Kingdom, 2022, pp. 1707-1710 11 July 2022

Jackson, Peter, Merrell, Kelly, Simon, Richard, and Linte, Cristian A. 2022, Investigating uncertainty in augmented reality enhanced renal navigation using in vitro patient-specific tissue-mimicking phantoms, 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), Glasgow, Scotland, United Kingdom, pp.2997-3002. 11 July 2022

Yang, Zixin, Lin, Shan, Simon, Richard, and Linte, Cristian A. 2022, Endoscope Localization and Dense Surgical Scene Reconstruction for Stereo Endoscopy by Unsupervised Optical Flow and Kanade-Lucas-Tomasi Tracking, 2022 44th Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), Glasgow, Scotland, United Kingdom, pp. 4839-4842. 11 July 2022

2021

Jackson, P., Simon, R., and Linte, C. 2021, Integrating Real-time Video View with Pre-operative Models for Image-guided Renal Navigation: An in vitro Evaluation Study, 2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC). 31 December 2021

Upendra, Roshan Reddy, Hasan, S. M. Kamrul, Simon, Richard, Wentz, Brian Jamison, Shontz, Suzanne M., Sacks, Michael S., and Linte, Cristian A., 2021, Motion Extraction of the Right Ventricle from 4D Cardiac Cine MRI Using A Deep Learning-Based Deformable Registration Framework, 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp. 3795-3799, 31 December 2021.

N. Tasneem et al. 2021, "Trap Capture and Emission Dynamics in Ferroelectric Field-Effect Transistors and their Impact on Device Operation and Reliability," 2021 IEEE International Electron Devices Meeting (IEDM), 2021, pp. 6.1.1-6.1.4, doi: 10.1109/IEDM19574.2021.9720615. 16 December 2021

Packard, Glenn, Spaulding, Carolyn, Taylor, Alex, Hirschman, Karl, Williams, Scott, and Kurinec, Santosh 2021, Selective phosphorus doping of polycrystalline silicon on glass using self-assembled monolayer doping (MLD) and flash anneal, Materials Letters, Volume 305, 130780, ISSN 0167-577X, 15 December 2021.

Sun, Zheng, Xu, Ke, Liu, Chang, Beaumariage, Jonathan, Liang, Jierui, Fullerton-Shirey, Susan K., Shi, Zhe-Yu, Wu, Jian, and Snoke, David, 2021, Photoluminescence Switching Effect in a Two-Dimensional Atomic Crystal, ACS Nano 2021 15 (12), 19439-19445, DOI: 10.1021/acsnano.1c06016. 08 December 2021

2020

Upendra, Roshan R., Wentz, Brian J., Shontz, Suzanne M., & Linte, Cristian A., 2020, A Convolutional Neural Network-based Deformable Image Registration Method for Cardiac Motion Estimation from Cine Cardiac MRI Images. Computing in Cardiology Conference (CinC), 47 (). Retrieved from https://par.nsf.gov/biblio/10296210. 

Sahoo, Pankaj J., Feng, Tao, Qiao, Jie, 2020 "Dynamic pulse propagation modelling for predictive femtosecond-laser-microbonding of transparent materials" Optics Express, Volume 28, Issue 21, pp. 31103-31118

Qiao, Jie, Feng, Tao, Sahoo, Pankaj K., Chen, Gong, 2020 "Ultrafast-laser-enabled Polishing, and Waveguide Writing for Optics and Microchip Laser Fabrications" SPIE Laser-induced Damage in Optical Materials 2020, 115140H

Mohammadi, F., Dangi, S., Shontz, S.M., and Linte, C. A., 2020, A Direct High-Order Curvilinear Triangular Mesh Generation Method Using an Advancing Front Technique. In: Krzhizhanovskaya V. et al. (eds) Computational Science – ICCS 2020. ICCS 2020. Lecture Notes in Computer Science, vol 12138. Springer, Cham. https://doi.org/10.1007/978-3-030-50417-5_6, 15 June 2020.

Hartensveld, M., Melanson, B., and Zhang, J., 2020. Electrostatic field effect light-emitting diode. IEEE Photonics Journal, 12(3), 1-8, 04 May 2020

2019

Lisse, C. M., Zemcov, M. B., Poppe, A. R., McNutt, R. L., Brandt, P. C., Horanyi, M., Beichman, C., Szalay, J. R., and Draine, B., 2019, Interstellar Probe Observations of the Solar System's Debris Disks, AGU Fall Meeting Abstracts, 2019, SH54A-08, December 2019.

Deenadayalan, V., Thomas, P. and Preble, S., 2019, Fabrication of Silicon photonic circuits with integrated thermo-optic heaters for education, 2019 30th Annual SEMI Advanced Semiconductor Manufacturing Conference (ASMC), pp. 1-5, 08 August 2019.

Fei, Baowei and Linte, Cristian A., 2019, Scale ratio ICP for 3D registration of coronary venous anatomy with left ventricular epicardial surface to guide CRT lead placement (Erratum), Medical Imaging 2019: Image-Guided Procedures, Robotic Interventions, and Modeling, 10951, 109513B, 14 June 2019.

Jovanovic, Nemanja, Figer, Don, and 48 colleagues, 2019, Enabling the next generation of scientific discoveries by embracing photonic technologies, Bulletin of the American Astronomical Society, 51, 270, 17 Jul 2019.

Krainak, Michael, Qioa, Jie, and 40 colleagues 2019, Integrated photonics for NASA applications, Components and Packaging for Laser Systems V, 10899, 108990F, 4 March 2019.