THOMAS H. GOSNELL SCHOOL OF LIFE SCIENCES

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Gregory Babbitt

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

E.G, Ryen, et al. "Ecological Foraging Models as Inspiration for Optimized Recycling Systems in the Circular Economy." RESOURCES CONSERVATION AND RECYCLING. 135 (2018): 48-57. Print. *

G.A., Babbitt, et al. "DROIDS 1.2 – a GUI-based Pipeline for GPU-accelerated Comparative Protein Dynamics." BIOPHYSICAL JOURNAL 114. (2018): 1009-1017. Print. *

G.A., Babbitt, et al. "Triplet codon organization optimizes the impact of synonymous mutation on nucleic acid molecular dynamics." JOURNAL OF MOLECULAR EVOLUTION 86. (2018): 91-102. Print. *

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Feng Cui

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Published Conference Proceedings

Li, Rui, et al. "Sparse Covariance Modeling in High Dimensions with Gaussian Processes." Proceedings of the Neural Information Processing Systems 2018. Ed. S. Bengio, et al. Montreal, Canada: n.p., 2018. Web. *

Bao, Feifei, et al. "P53 Binding Sites in Normal and Cancer Cells are Characterized by Distinct Chromatin Context." Proceedings of the AACR Annual Meeting 2018. Ed. Chi Van Dang. Chicago, IL: n.p., 2018. Print.

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Elizabeth Hane

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Franklin, Scott V., et al. "Improving Retention Through Metacognition: A Program for Deaf/Hard-of-Hearing and First Generation STEM College Students." Journal of College Science Teaching 48. 2 (2018): 21-27. Print. «

Published Conference Proceedings

Hane, Elizabeth N. and Scott V. Franklin. "A Metacognitive Toolkit to Improve Retention of STEM Students from Excluded Identities." Proceedings of the AAC&U Transforming STEM Education Conference, November, 2018, Atlanta, GA. Ed. AAC&U. Washington, DC: n.p., Web. «

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Andre Hudson

Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Babbitt, Hudson, et al. "Synonymous Codon Organization Reduces the Impact of Mutation on Nucleic Acid Molecular Dynamics." J. Mol. Evo. (2018): N/A. Web. *

AO, Parthasarathy, et al. "A Three-ring Circus: Metabolism of the Three Proteogenic Aromatic Amino Acids and Their Role in the Health of Plants and Animals." Front Mol Biosci. (2018): N/A. Web. *

AO, Parthasarathy, et al. "Isolation and Genomic Characterization of Six Endophytic Bacteria Isolated from Saccharum sp (sugarcane): Insights into Antibiotic, Secondary Metabolite and Quorum Sensing Metabolism." Journal of Genomics 6. (2018): 117-121. Web. *

AO, Parthasarathy, et al. "Whole Genome Sequencing and Annotation of Exiguobacterium sp. RIT 452, an Antibiotic Producing Strain Isolated from a Pond Located on the Campus of the Rochester Institute of Technology." Microbiol Resour Announc. (2018): N/A. Web. *

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Carmody McCalley

Assistant Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Woodcroft, B. J., et al. "Genome-centric view of carbon processing in thawing permafrost." Nature 560. (2018): 49-54. Print. *

Singleton, C. M., et al. "Methanotrophy across a natural permafrost thaw environment." The ISME Journal. (2018): doi:0.1038/s41396-018-0065-5. Web. *

Palace, M., et al. "Determining Subarctic Peatland Vegetation Using an Unmanned Aerial System (UAS)." Remote Sensing 10. (2018): 1498. Web. *

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Dina Newman

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Wright, L. Kate, et al. "Arrows in Biology: Lack of Clarity and Consistency Points to Confusion for Learners." CBE - Life Sciences Education 17. 1 (2018): ar6, 1-13. Web. *

Newman, Dina L., et al. "A Community-Building Framework for Collaborative Research Coordination across the Education and Biology Research Disciplines." CBE - Life Sciences Education 17. 2 (2018): es2, 1-10. Web. *

Newman, Dina L., et al. "Physical Models Can Provide Superior Learning Opportunities Beyond the Benefits of Active Engagement." Biochemistry and Molecular Biology Education 46. 5 (2018): 435-444. Print. *

Donahue, Callie J., et al. "A Close-up Look at PCR." CourseSource. (2018): in press. Web. *

Invited Keynote/Presentation

Wright, L. Kate and Dina L. Newman. "High School Teacher Conceptions and Lessons about Meiosis Reveal a Critical gap in Molecular level Knowledge." Society for the Advancement of Biology Education Research Annual Meeting. Society for the Advancemen tof Education Research. Minneapolis, MN. 29 Jul. 2018. Conference Presentation. «

Gardner, Stephanie, et al. "Development and Testing of Competencies for Experimentation in Biology." Society for the Advancement of Biology Education Research Annual Meeting. Society for the Advancemen tof Education Research. Minneapolis, MN. 29 Jul. 2018. Conference Presentation. «

Newman, Dina L. and L. Kate Wright. "How to Get More Out of Conceptual Assessment Data." Society for the Advancement of Biology Education Research Annual Meeting. Society for the Advancemen tof Education Research. Minneapolis, MN. 29 Jul. 2018. Conference Presentation. «

Newman, Dina L., et al. "Gauging the Impact of Organic Chemistry REActivities at a Four-Year and a Two-Year Institution." Biennial Conference on Chemical Education. American Chemical Society. South Bend, IN. 2 Aug. 2018. Conference Presentation. «

Newman, Dina L., et al. "Undergraduate Faculty Genetics Education Workshop." American Society of Human Genetics Annual Meeting. American Society of Human Genetics. San Diego, CA. 17 Oct. 2018. Conference Presentation.

Collison, Christina Goudreau, et al. "Reformed Experimental Activities (REActivities): Rethinking How We Deliver an Organic Chemistry Lab." Biennial Conference on Chemical Education. American Chemical Society. South Bend, IN. 30 Jul. 2018. Conference Presentation. «

Gardner, Stephanie, et al. "Development and Testing of Assessments for Measuring Experimentation Competence in Biology." Society for the Advancement of Biology Education Research Annual Meeting. Society for the Advancemen tof Education Research. Minneapolis, MN. 27 Jul. 2018. Conference Presentation. «

Peer Reviewed/Juried Poster Presentation

Magelhaes, Rita Margarida Quinones de, et al. "Inclusive Excellence: A Three-Pronged Approach to Increasing Diversity and Retention in Science." Proceedings of the Society for the Advancement of Biology Education Research, July27-29, 2018, Minneapolis, MN. Ed. Mary Pat Wenderoth. Minneapolis, MN: n.p.. «

Dy, Grace Elizabeth C., L. Kate Wright, and Dina L. Newman. "Visual Representations of Meiosis in Biology Textbooks Fail to Provide Important Conceptual Information." Proceedings of the Society for the Advancement of Biology Education Research, July27-29, 2018, Minneapolis, MN. Ed. Mary Pat Wenderoth. Minneapolis, MN: n.p.. «

Newman, Dina L., et al. "How is Meiosis Taught in High School?" Proceedings of the American Society of Human Genetics Annual Meeting, October 16-20, 2018, San Diego, CA. Ed. Bruce R. Korf. San Diego, CA: n.p.. «

Newman, Dina L., et al. "Fostering Inclusivity and Equity: a Three-Strand Approach for Research, Classroom and Community." Proceedings of the 2018 Transforming STEM Higher Education Conference. Ed. Kelly Mack. Atlanta, GA: AAC&U. *

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Susan Smith

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Hoh, Christina, Susan Smith Pagano, and Christopher J. Norment. "Spatial Variation in White-throated Sparrow (Zonotrichia albicollis) Refueling Rate Near a Migratory Barrier." Wilson Journal of Ornithology 130. (2018): 891-901. Print. *

Win, Shwe Sin, et al. "Anaerobic Digestion of Black Solider Fly Larvae (BSFL) Biomass as Part of an Integrated Biorefinery." Renewable Energy 127. (2018): 705-712. Print. *

Journal Editor

Pagano, Susan Smith, ed. Condor:Ornithological Applications. Chicago, IL: American Ornithological Society, 2018. Print.

Pagano, Susan Smith, ed. Northeastern Naturalist. Steuben, ME: Eagle Hill Institute, 2018. Print.

Invited Keynote/Presentation

Pagano, Susan Smith. "Native Berries for Migratory Birds." Native Plants in the Landscape Conference. Bowman's Hill Wildlife Preserve. Millersville, PA. 8 Jun. 2018. Keynote Speech.

Pagano, Susan Smith and Calvin Carrington. "Stopover Physiology of Migratory Songbirds Near the South Shore of Lake Ontario." International Ornithological Congress 2018. IOC. Vancouver, BC, Canada. 21 Aug. 2018. Conference Presentation.

Pagano, Susan Smith. "Can Invasive Fruits be Nutritional Traps." Northeast Natural History Conference. Eagle Hill Institute. Burlington, VT. 14 Apr. 2018. Conference Presentation.

Border, Molly, et al. "Does Japanese Barberry Affect the Physiological Condition of Breeding Male Ovenbirds?" 1. 45th Annual Rochester Academy of Sciences Fall Scientific Paper Session. SUNY College at Geneseo. Geneseo, NY. 10 Nov. 2018. Conference Presentation.

Horst, Gretchen, Andrea Patterson, and Susan Smith Pagano. "Morrow’s Honeysuckle Impacts Nutrition, Body Condition, and Plumage Coloration of Baltimore Orioles." 45th Annual Rochester Academy of Sciences Fall Scientific Paper Session. SUNY College at Geneseo. Geneseo, NY. 10 Nov. 2018. Conference Presentation.

Tarmey, Signe, et al. "Characterizing the Chemical Fingerprint of Smith’s Buckthorn, a Rhamnaceae Species Native to Colorado and New Mexico." Rochester Section of the American Chemical Society Student Research Symposium. SUNY College at Brockport. Brockport, NY. 14 Apr. 2018. Conference Presentation.

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Hyla Sweet

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Peer Reviewed/Juried Poster Presentation

Azriel, Guy, et al. "3D Modeling of a Brittle Star Vitellaria Larva." Proceedings of the Rochester Academy of Science 45th Annual Fall Scientific Paper Session. Ed. RAS. Geneseo, NY: n.p..

Shumway, Alexandria and Hyla Sweet. "Transcriptomics of the Ophioplocus esmarki Brittle Star." Proceedings of the Rochester Academy of Science 45th Annual Fall Scientific Paper Session. Ed. RAS. Geneseo, NY: n.p..

Invited Keynote/Presentation

Moser, Jacqueline and Hyla Sweet. "Coelomogenesis in a Brittle Star Vitellaria Larva." Developmental Biology of the Sea Urchin XXV. Marine Biological Laboratory. Woods Hole, MA. 19 Oct. 2018. Conference Presentation.

Jaff, Nasreen and Hyla Sweet. "Development of the Axial Complex in the Brittle Star Ophioplocus esmarki." Rochester Academy of Science 45th Annual Fall Scientific Paper Session. State University of New York at Geneseo. Geneseo, NY. 10 Nov. 2018. Conference Presentation.

Moser, Jacqueline and Hyla Sweet. "Coelomogenesis in a Brittle Star Vitellaria Larva." Rochester Academy of Science 45th Annual Fall Scientific Paper Session. State University of New York at Geneseo. Geneseo, NY. 10 Nov. 2018. Conference Presentation.

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Anna Tyler

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Kuntz, K.L. and A.C. Tyler. "Bioturbating Invertebrates Enahnce Decomposition and Nitrogen Cycling in Urban Stormwater Ponds." Journal of Urban Ecology 4. 1 (2018): juy015. Print. *

Invited Keynote/Presentation

Tyler, A.C. "Rethinking Wetland Restoration in a Changing Environment." New York State Wetlands Forum Annual Meeting. New York State Wetlands Forum Annual Meeting. Watkins Glen, NY. 11 Apr. 2018. Conference Presentation. ∆

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Leslie Kate Wright

Associate Professor
Thomas H. Gosnell School of Life Sciences
College of Science

2018 Submissions

Journal Paper

Wright, L. Kate, et al. "Arrows in Biology: Lack of Clarity and Consistency Points to Confusion for Learners." CBE Life Sciences Education Vol 17. 1 (2018): 1-13. Print. *

Newman, Dina L., et al. "Physical Models can Provide Superior Learning Opportunities Beyond the Benefits of Active Engagements." Biochemistry and Molecular Biology Education 46. 5 (2018): 435-44. Print. *

Peer Reviewed/Juried Poster Presentation

Wright, L. Kate and Dina L. Newman. "High School Teacher Conceptions and Lessons about Meiosis Reveal a Critical gap in Molecular level Knowledge." Proceedings of the Society for the Advancement of Biology Education Research, 8th annual meeting. Ed. Mary Pat Wenderworth. Minneapolis, MN: n.p.. *

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