BIOMEDICAL ENGINEERING

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Vinay Abhyankar

Assistant Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

Inyang, E., et al. "Modulation of in Vitro Brain Endothelium by Mechanical Trauma: Structural and Functional Restoration by Poloxamer 188." Scientific Reports 10. 3054 (2020): 1-15. Web. *

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Iris Asllani

Research Associate Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

R.M., Marshall R.S., Pavol M.A., Cheung Y.K., Asllani I., Lazar. "Correlates Linearly with Mean Flow Velocity by Transcranial Doppler below a Definable Threshold." Cerebrovascular Diseases. (2020): 21-27. Print. *

Cercignani, F Di Lorenzo, B Orzsik, W Strawson, K Gialopsou, M Bozzali, I Asllani, M. "Combined Proton and Sodium MRI to Study Short-term Effects of Transcranial Direct Current Stimulation of M1." Clinical Neurophysiology 131. (2020): e174. Print. *

Published Conference Proceedings

M, Asllani I, Lorenzo F, Mancini M, Gialopsou K, Woods J, Bozzali M, Cercignani. "Short-term Effects of Transcranial Direct Current Stimulation (tDCS) on Cerebral lood flow measured with ASL MRI." Proceedings of the International Society for Magnetic Resonance in Medicine, Online, 2020. Ed. ISMRM. San Francisco, USA: n.p., Print. *

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Jennifer Bailey

Senior Lecturer
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Published Conference Proceedings

MacKinnon, Emilie, Jennifer Bailey, and Ronald Quintero. "Thinking Aloud: How do Biomedical Engineering Students Solve SV Tasks." Proceedings of the 2020 ASEE St. Lawrence Section Annual Conference. Ed. NA. Rochester, New York: n.p., 2020. Web. *

Bailey, Jennifer L and Michael RIchards. "Entrepreneurially Minded Learning in a Physiological Signals Analysis Lab: Work in Progress." Proceedings of the ASEE National Conference and Exposition. Ed. NA. remote, US: n.p., Web. «

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Steven Day

Associate Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Published Conference Proceedings

Reuter, Steven P, et al. "Left Ventricular Assist Device Thrombus Detection Using Wavelets and Image Classification." Proceedings of the International Mechanical Engineering Congress and Exposition (IMECE). Ed. ASME IMECE. Portland, OR, Virtual: n.p., 2020. Web. *

Full Patent

Refaii, Majed J. and Steven W. Day. "ABO Blood Group Point-of-Care Chip Testing." U.S. Patent U.S. Nonprovisional Patent Application No. 17/065,002, filed. 7 Oct. 2020.

Invited Keynote/Presentation

Day, Steven W, Matthew Poskus, and Thomas R Gaborski. "Computational Modeling of Blood Damage and Mass Transport in a Membrane-based Microfluidic Device." ASAIO Annual Meeting. ASAIO. Virtual, On Demand. 10-13 Jun. 2020. Conference Presentation.

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Thomas Gaborski

Associate Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

Allahyari, Z, et al. "Micropatterned Poly(ethylene glycol) Islands Disrupt Endothelial Cell–Substrate Interactions Differently from Microporous Membranes." ACS Biomaterials Science & Engineering 6. 2 (2020): 959-968. Print. *

Hill, K, et al. "Second Generation Nanoporous Silicon Nitride Membranes for High Toxin Clearance and Small Format Hemodialysis." Advanced Healthcare Materials. (2020): 1900750. Print. *

Khire, TS, et al. "Microvascular Mimetics for the Study of Leukocyte–Endothelial Interactions." Cellular and Molecular Bioengineering 13. (2020): 125-139. Print. *

Piazza, N, et al. "Therapeutic Potential of Extracellular Vesicles in Degenerative Diseases of the Intervertebral Disc." Frontiers Bioengineering and Biotechnology 8. (2020): 311. Print. *

Miler, JJ, et al. "Free Standing, Large Area Silicon Nitride Membranes for High Toxin Clearance and Small Format Hemodialysis." Membranes 10. 6 (2020): 119. Print. *

Dehghani, M, et al. "Systematic Evaluation of PKH Labelling on Extracellular Vesicle Size by Nanoparticle Tracking Analysis." Scientific Reports 10. (2020): 9533. Print. *

Luca, K, et al. "Critical Flux Behavior of Ultrathin Silicon Nanomembranes." Separathion and Purification Technology 251. (2020): 117342. Print. *

Ramirez, MM, et al. "Use of Nanosphere Self-assembly to Pattern Ultrathin Membranes for the Study of Extracellular Vesicles." Nanoscale Advances 2. (2020): 4427-4436. Print. *

Salminen, AT, et al. "In Vitro Studies of Transendothelial Migration for Biological and Drug Discovery." Frontiers in Medical Technology 2. (2020): 600616. Print. *

Salminen, AT, et al. "Endothelial Cell Apicobasal Polarity Facilitates Distinct IL-8 Secretion and Immune Responses to Systemic vs. Local Inflammation." Integrative Biology 12. 11 (2020): 275-289. Print. *

Gholizadeh, S, et al. "Robust Variable and Gradient Thickness Membranes for Tissue Barrier Models." Advanced Materials Technology 5. 12 (2020): 2000474. Print. *

Rode, RP, et al. "Trilayer Interlinked Graphene Oxide Membrane for Wearable Hemodialyzer." Advanced Materials Interfaces 8. 3 (2020): 2170011. Print. *

Invited Keynote/Presentation

Gaborski, TR. "Development of Nanopocket Membranes for Tangential Flow Analyte Capture (TFAC) of Extracellular Vesicles." North American Membrane Society Annual Meeting. North American Membrane Society. Phoenix, AZ. 20 May 2020. Conference Presentation. *

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Blanca Lapizco-Encinas

Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

B.H., Lapizco-Encinas, and N. Hill. "Continuous Flow Separation of Particles with Insulator-based Dielectrophoresis Chromatography." Analytical and Bioanalytical Chemistry. (2020): 1-12. Print. £ ≠

B.H., Lapizco-Encinas, et al. "Rapid Escherichia coli (E. coli) Trapping and Retrieval from Bodily Fluids via a Three-Dimensional (3D) Microbeads Stacked Nano-Device." ACS Applied Materials & Interfaces. (2020): 1-12. Print. £ ≠

Lapizco-Encinas,, B. H. "Microscale Electrokinetic Assessments of Proteins Employing Insulating Structures." Curr. Opin. Chem. Eng. 29. (2020): 9-16. Web. *

Quevedo, D. F., et al. "Electrokinetic Characterization of Synthetic Protein Nanoparticles." Beilstein J. Nanotechnol. 11. (2020): 1556–1567. Web. *

Antunez-Vela, S., et al. "Simultaneous Determination of Linear and Nonlinear Electrophoretic Mobilities of Cells and Microparticles." Anal. Chem. 92. (2020): 14885–14891. Web. *

Peña, A. Coll De, et al. "Creation of an Electrokinetic Characterization Library for the Detection and Identification of Biological Cells." Anal. Bioanal. Chem. 412. (2020): 3935–3945. Web. *

Peña, A. Coll De, N. Hill, and B. H. Lapizco-Encinas. "Determination of the Empirical Electrokinetic Equilibrium Condition of Microorganisms in Microfluidic Devices." Biosensors 10. (2020): 148. Web. *

Korensky, G., et al. "Single Chlamydomonas Reinhardtii Cell Separation from Bacterial Cells and Auto-fluorescence Tracking with a Nanosieve Device." Electrophoresis, DOI: 10.1002/elps.202000146. (2020): 1-10. Web. *

Hill, N. and B. H. Lapizco-Encinas. "Continuous Flow Separation of Particles with Insulator-based Dielectrophoresis Chromatography." Anal. Bioanal. Chem. 412. (2020): 3891–3902. Web. *

Lapizco-Encinas, B. H. and H. Wätzig. "Editorial: ITP and AES Conferences 2019." Electrophoresis 41. (2020): 1825-1825. Web. *

Cardenas-Benitez, B., et al. "Direct Current Electrokinetic Particle Trapping in Insulator-Based Microfluidics: Theory and Experiments." Anal. Chem. 92. (2020): 12871–12879. Web. *

Hakim, K. S. and B. H. Lapizco‐Encinas. "Analysis of Microorganisms with Nonlinear Electrokinetic Microsystems." Electrophoresis DOI: 10.1002/elps.20200023. (2020): 1-10. Web. *

Chen, X., et al. "Rapid Escherichia coli Trapping and Retrieval from Bodily Fluids via a Three-Dimensional Bead-Stacked Nanodevice." ACS Appl. Mater. Interfaces 12. (2020): 7888–7896. Web. *

Lapizco‐Encinas, B. H. and H. Wätzig. "Focus on Reviews 2020." Electrophoresis 41. (2020): 9-9. Web. *

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Cristian Linte

Associate Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

Upendra, R R., R. A. Simon, and C. A. Linte. "Supervised Registration of Late Gadolinium Enhanced Cardiac MRI and Cine Cardiac MRI using Convolutional Neural Networks." Springer\\\'s Comm Comout Inform Science 1248. (2020): 208-220. Print. «

Hasan, SM K., R. A. Simon, and C. A. Linte. "L-CO-Net: Learned Condensation-Optimization Network for Segmentation and Clinical Parameter Estimation from Cardiac Cine MRI." IEEE Eng Med Biol. (2020): 1217-1220. Web. *

Jackson, P., R. Simon, and C. A. Linte. "Surgical Tracking, Registration, and Navigation Characterization for Image-guided Renal Interventions." IEEE Eng Med Biol.. (2020): 5081-84. Web. *

Mohammadi, F., et al. "A Direct High-order Curvilinear Triangular Mesh Generation Method Using an Advancing Front Technique." Springer Lect Notes Comput Sci 12138. (2020): 1-14. Print. *

V, 6. Almekkawy M, Chen J, Ellis M, Haemmerich D, Holmes D, Linte CA, Panescu D, Pearce J, Prakash P and Zderic. "Therapeutic Systems and Technologies: State-of-the-Art, Applications, Opportunities and Challenges." IEEE Rev Biomed Eng. 13. (2019): 325-339. Print. *

Book Chapter

Jalalahmadi, G., M. Helguera, and C. A. Linte. "Abdominal Aortic Aneurysms: Morphology, Risk Factors, Management and Image-based Modeling Strategies." Aortic Aneurysms: Signs, Symptoms and Management. Ed. Harky, A.. Liverpool, United Kingdom: Nova Publishers, 2020. 98-148. Print. *

Published Conference Proceedings

Upendra, R. R., et al. "Convolutional Neural Network-based Deformable Image Registration Method for Cardiac Motion Estimation from Cine Cardiac MRI Images." Proceedings of the Computing in Cardiology. Ed. Corsi C. and Severi S. Rimini, Italy: IEEE, 2020. Web. *

Beam, C., N. F. Otani, and C. A. Linte. "Reconstructing Cardiac Wave Dynamics from Myocardial Motion Data." Proceedings of the Computing in Cardiology. Ed. Corsi, C. and Severi, S. Rimini, Italy: IEEEE, 2020. Web. *

Upendra, R R., S. Dangi, and C. A. Linte. "Automated Segmentation of Cardiac Chambers from Cine Cardiac MRI Using an Adversarial Network Architecture." Proceedings of the SPIE Medical Imaging - Image-Guided procedures, Robotic Interventions and Modeling. Ed. Linte, C. A. and Fei, B. Houston, TX: SPIE, 2020. Web. *

Hasan, SM K. and C. A. Linte. "CondenseUNet: a memory-efficient condensely-connected architecture for bi-ventricular blood pool and myocardium segmentation." Proceedings of the SPIE Medical Imaging - Image-Guided procedures, Robotic Interventions and Modeling. Ed. Linte C. A. and Bei, B. Houston, TX: SPIE, 2020. Web. *

Jalalahmadi, G., M. Helguera, and C. A. Linte. "A Machine Leaning Approach for Abdominal Aortic Aneurysm Severity Assessment Using Geometric, Biomechanical, and Patient-specific Historical Clinical Features." Proceedings of the SPIE Medical Imaging - Biomedical Applications in Molecular, Structural, and Functional Imaging. Ed. Kroll A. and Barjor G. Houston, TX: SPIE, 2020. Web. *

Li, M., et al. "Noise Reduction for the Inverse Solution for One-dimensional Cardiac Active Stress Reconstruction." Proceedings of the SPIE Medical Imaging - Biomedical Applications in Molecular, Structural, and Functional Imaging. Ed. Kroll, A. and Barjor G. Houston, TX: SPIE, 2020. Web. *

Beam, C., C. A. Linte, and N. F. Otani. "An Implementation of Data Assimilation Techniques for Transmural Visualization of Action Potential Propagation in Cardiac Tissue." Proceedings of the SPIE Medical Imaging - Biomedical Applications in Molecular, Structural, and Functional Imaging. Ed. Kroll, A. and Barjor, G. Houston, TX: SPIE, 2020. Web. *

Liu, D., et al. "Combining Statistical Shape Model and Principal Component Analysis to Estimate Left Ventricular Volume and Ejection Fraction." Proceedings of the SPIE Medical Imaging - Ultrasound Imaging and Tomography. Ed. Byrem, B. C. and Ruiter, N. V. Houston, TX: SPIE, 2020. Web. *

Jackson, P., R. Simon, and C. A. Linte. "Surgical Tracking Characterization and Registration Performance Assessment for Image-guided Renal Interventions." Proceedings of the Computer Assisted Radiology and Surgery - International Society of Computer-aided Surgery. Ed. Lemke, H. U. Munich, Germany: Springer, 2020. Print. *

Invited Keynote/Presentation

Linte, C. A. "A Modeling Approach to Cardiac Ablation Lesions: An Engineering Perspective." Atrial Fibrillation Symposium. Johnson & Johnson Institute & Biosense Webster. Madrid, Spain. 14 Feb. 2020. Lecture. ∆

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Michael Richards

Assistant Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

Jadamba, Baasansuren, et al. "A Convex Inversion Framework for Identifying Parameters in Saddle Point Problems with Applications to Inverse Incompressible Elasticity." Inverse Problems 36. 7 (2020): 74003. Print. *

Jadamba, Baasansuren, et al. "Analyzing the Role of the Inf-Sup Condition for Parameter Identification in Saddle Point problems with Application in Elasticity Imaging." Optimization 69. 12 (2020): 2577-2610. Print. *

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Karin Wuertz-Kozak

Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

Piazza, Nathan, et al. "Therapeutic Potential of Extracellular Vesicles in Degenerative Diseases of the Intervertebral Disc." Front Bioeng Biotechnol 17. 8 (2020): 311. Web. «

Cambria, Elena, et al. "Cell-Laden Agarose-Collagen Composite Hydrogels for Mechanotransduction Studies." Front Bioeng Biotechnol 21. 8 (2020): 346. Web. «

Cazzanelli, Petra and Karin Wuertz-Kozak. "MicroRNAs in Intervertebral Disc Degeneration, Apoptosis, Inflammation, and Mechanobiology." Int J Mol Sci 21. 10 (2020): E3601. Web. «

Sadowska, Aleksandra, et al. "Hypo-osmotic loading induces expression of IL-6 in nucleus pulposus cells of the intervertebral disc independent of TRPV4 and TRPM7." Front Pharmacology. 11 (2020): 952. Web. «

Tai, YK, et al. "Magnetic fields modulate metabolism and gut microbiome in correlation with Pgc-1α expression: Follow-up to an in vitro magnetic mitohormetic study." FASEB J 34. 8 (2020): 11143-11167. Web. «

Schmid, Bettina, et al. "The role of Cutibacterium acnes in intervertebral disc inflammation." Biomedicines 8. 7 (2020): E186. Web. «

Cambria, Elena, et al. "TRPV4 Inhibition and CRISPR-Cas9 Knockout Reduce Inflammation Induced by Hyper-physiological Stretching in Hhuman Annulus Fibrosus Cells." Cells 9. (2020): 1736. Web. «

Pieri, Andrea De, et al. "Electrospinning and 3D bioprinting for intervertebral disc tissue engineering." JOR Spine 2020. (2020): epub ahead. Web. «

Wuertz-Kozak, K., et al. "Effects of early life stress on bone homeostasis in mice and humans." Int J Mol Sci 21. 18 (2020): E6634. Web. «

Schmidli, R.M., et al. "Fibronectin Fragments and Inflammation during Canine Intervertebral Disc Disease." Frontiers in Veterinary Science. (2020): epub ahead. Web. «

Journal Editor

Karin, Wuertz-Kozak,, ed. International Journal of Molecular Sciences. Basel, Switzerland: MDPI, 2020. Web. «

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Zhi Zheng

Assistant Professor
Biomedical Engineering
Kate Gleason College of Engineering

2020 Submissions

Journal Paper

Zheng, Zhi, et al. "A Randomized Controlled Trial of an Intelligent Robotic Response to Joint Attention Intervention System." Journal of autism and developmental disorders 50. no. 8 (2020): 2819-2831. Print. *

Choi, Wonchan, et al. "A Systematic Review of Mobile Health Technologies to Support Self-management of Concurrent Diabetes and Hypertension." Journal of the American Medical Informatics Association 27. no. 6 (2020): 939-945. Print. *

Peer Reviewed/Juried Poster Presentation

Zheng, Zhi, et al. "Can A Robot Encourage Physical Exercise for Older Adults? A Pilot Robot-Mediated Tai Chi Exercise Study." Proceedings of the American Medical Informatics Association 2020 Annual Symposium. Ed. NA. Chicago, IL: n.p.. *

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